Gene Bcav_2953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2953 
Symbol 
ID7861372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3295093 
End bp3295857 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content69% 
IMG OID643867051 
Productsuccinate dehydrogenase and fumarate reductase iron-sulfur protein 
Protein accessionYP_002882960 
Protein GI229821434 
COG category[C] Energy production and conversion 
COG ID[COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 
TIGRFAM ID[TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0477961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000138203 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCGCGA CCCTCGAGGC GACCGACGCC GCACCAGCTG TCGGCGAGGT GCCCTCCTTC 
GACGTCACGC TCCGCATCGA GCGGTACGAC CCGGACGCCG CCGACCCGAA GCCGTACTGG
CAGGAGTTCA CCGTCCGGGC GCACGGCACC GACCGCCTGC TCGACGCCCT CCACTCCATC
AAGTGGGACC AGGACGGGTC GCTGACGTTC CGCCGCTCGT GCGCGCACGG CGTGTGCGGG
TCGGACGCCA TGCGGATCAA CGGCCGCAAC CGCCTCGCGT GCAAGACGCT GCTCAAGGAC
CTCAACCCGG AGAAGGTCAT CACCGTCGAG CCCATCAAGG GCCTGCCGGT CGAGAAGGAC
CTCATCGTCG ACATGGAGCC GTTCTTCGCG TCCTACCGCG AGGTCATGCC GTTCCTCATG
ACGACGGGCA ACGCCCCGAC CCGCGAGCGG CTGCAGTCGG CGGCGCAACG GGAGCGCTAC
GACGACACCA CGAAGTGCAT CCTGTGCGCG GCGTGCACCA CGTCGTGCCC GGTCTTCTGG
TCGGACGGGC AGTACTTCGG CCCGGCCGCG ATCGTCAACG CGCACCGCTT CATCTTCGAC
AGCCGTGACG AGGGCGGGCA GCAGCGCCTG GAGATCCTCA ACGACAAGGA GGGCGTGTGG
CGGTGCCGCA CGACCTTCAA CTGCACCGAG GCGTGCCCGC GCGGCATCCA GGTGACGCAG
GCGATCGCCG AGGTCAAGCG CGCGATCCTC ACCCGCACCA TCTGA
 
Protein sequence
MTATLEATDA APAVGEVPSF DVTLRIERYD PDAADPKPYW QEFTVRAHGT DRLLDALHSI 
KWDQDGSLTF RRSCAHGVCG SDAMRINGRN RLACKTLLKD LNPEKVITVE PIKGLPVEKD
LIVDMEPFFA SYREVMPFLM TTGNAPTRER LQSAAQRERY DDTTKCILCA ACTTSCPVFW
SDGQYFGPAA IVNAHRFIFD SRDEGGQQRL EILNDKEGVW RCRTTFNCTE ACPRGIQVTQ
AIAEVKRAIL TRTI