Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_2944 |
Symbol | |
ID | 7861363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 3284162 |
End bp | 3285451 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643867042 |
Product | inner-membrane translocator |
Protein accession | YP_002882951 |
Protein GI | 229821425 |
COG category | [R] General function prediction only |
COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00126188 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGCTCG CACCGCCCCT CCAGCCGCAG CCGCACGCCG TCGTCGAGCC GGGTGCCGCA CCCGTCAAGA TCAGCTACCG CGCGCCGATC GCGTTCACCG TGCTCGGCCT GCTCGGCGTC TGGATGGCGG CTCTCGTACC CGCCGGCGAC ACGCAGATCC GCGTCTCCAC CGGGGCCGAC CTGTGGCAGC TCCCGCTGCT GGTCGTCCCC GCCGCGGCGA CGACGTGGGT GCTCGTGCTG CTCGCGCTGG GCCTGGCCGC GTTCTCCTGG GTGCAGGCCG TCCGACGGCG CCCCGTGGGC ACGTGGGTCG GCGTCGTCTT CGGCGTCCTG CTCGTCCTGG CGTTCCTCGT CTCGATCGGG GCGGGCAAGA CCCAGGTCGT CGCGCTGACG GGCATCCTCG CGGGCGCGCT GTTCCTCGCG ACGCCGCTGA TCTTCGGTGC GCTGAGCGGC GTCGTCTGCG AGCGGGTCGG CATCGTGAAC ATCGCGATCG AGGGCCAGCT GCTCGCCGGG GCGTTCCTCG CCGCCGTCGT GGCGTCGCTG ACGACGAGCG CCTACCTCGG GCTCGTCGCC GCCCCGATCG CGGGTGCCGG CGTCGGCGTG CTGCTCGTGT TCTTCTCGAT CAAGTACCAG GTCAACCAGA TCATCGTGGG CGTCGTGCTC AACGTCCTCG TGATCGGCCT GACGAGCTTC CTGTTCTCGA CGGTGCTGAC CGAGCACGAC GCGTGGAACC GGCGCACGCC GCTGCCGACG GTGCCGATCC CGGTGCTGTC GGAGATCCCG CTGATCGGAC CCGTCCTGTT CCGGCAGACG GTGCTCGTGT ACCTCATGTA CGTCGTCGTC ATCGCCCTGC AGGTCTACCT GTTCCGCAGC CGGTGGGGCC TGAGGGTGCG CGCGGTCGGC GAGCACCCGA AGGCGGCGGA CACGGTCGGC ATCGACGTCA ACCGCACCCG GTGGCGCAAC GCGATCCTGG GGTCGGCCAT CGCTGGCCTG GGCGGGGCGT TCTTCACCGT CGCGTCCGGT CTGGCGTTCG GCAAGGAGAT GACCGGCGGG CGCGGCTTCA TCGCGCTCGC GGCGATGATC CTGGGCCGGT GGAGCCCGAA GGGCGCTGTC GCGGCGGCCC TGCTGTTCGG CTTCTCGGAG AACCTGCGGA CCGTGCTGCC GACGCTCGAG GTGAGCGTGC CGCCGCAGCT CCTGCTCATG CTCCCGTACA TCGTGACGAT CCTCGCGGTG GCCGGGTTCG CCGGACGCGT GCGTGCGCCG GCGGCCGAGG GCATCCCCTA CGTGAAGTGA
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Protein sequence | MTLAPPLQPQ PHAVVEPGAA PVKISYRAPI AFTVLGLLGV WMAALVPAGD TQIRVSTGAD LWQLPLLVVP AAATTWVLVL LALGLAAFSW VQAVRRRPVG TWVGVVFGVL LVLAFLVSIG AGKTQVVALT GILAGALFLA TPLIFGALSG VVCERVGIVN IAIEGQLLAG AFLAAVVASL TTSAYLGLVA APIAGAGVGV LLVFFSIKYQ VNQIIVGVVL NVLVIGLTSF LFSTVLTEHD AWNRRTPLPT VPIPVLSEIP LIGPVLFRQT VLVYLMYVVV IALQVYLFRS RWGLRVRAVG EHPKAADTVG IDVNRTRWRN AILGSAIAGL GGAFFTVASG LAFGKEMTGG RGFIALAAMI LGRWSPKGAV AAALLFGFSE NLRTVLPTLE VSVPPQLLLM LPYIVTILAV AGFAGRVRAP AAEGIPYVK
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