Gene Bcav_2928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2928 
Symbol 
ID7861347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3268176 
End bp3268967 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content70% 
IMG OID643867026 
Producthypothetical protein 
Protein accessionYP_002882935 
Protein GI229821409 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00045368 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCACCG ACGACACCCG TCGGACCCAC GTCAAGGGCC GGATCACTCT GCGCGGCGAG 
CACGTCCCGA TCACGACGAC CGACGAGCGG CTCCTCGCCA CCGACCACTC GTCGTCGTGG
GTGCACCAGG ACCCGTGGCG GGTGCTGCGG ATCCAGTCGG AGTTCGTCGA GGGATTCGGC
GCGCTCGCCG GGCTCGGTCC CGCCGTCAGC GTGTTCGGCT CGGCCCGGAT CAAGGCGGGC
GAACCGGAGT ACGAGCTCGC CGAGCAGGTC GCGCGCGAGC TCGTCCGCGC CGGCTACGCC
GTCATCACCG GGGGCGGTCC GGGTCTCATG GAGGCGGCGA ACAGGGGAGC GCACGAGGAG
GGCGGGACGT CCGTCGGCCT CGGGATCGAG CTGCCCTTCG AGCAGGGCAT GAACGAGTGG
GTCGACCTCG GGGTCGACTT CCGCTACTTC TTCGCCCGCA AGACGATGTT CGTCAAGTAC
GCCGAGGGCT TCATCGTGCT GCCCGGCGGG TTCGGCACGT TCGACGAGCT GTTCGAGGCG
ATGACGCTCG TCCAGACGAA GAAGGTGCGC GGCTTCCCGA TCGTGCTCGT CGGGACGGAC
TACTGGGGTG GCCTCATCGA CTGGCTCCGC GGCACCGTGC TCGAGCGCGG GCTCATCTCA
CCGCCGGACC TCGAGCTGCT CCAGCTCGTC GACGACCCGG CGGATGCGGT GAGGCTCGTC
GTCGACGCGG GGAACGACCT GTTCGCGGCC GAGGACTCGG CGGCGCGCGA CGCCGCGGAG
GGGGCGGACT GA
 
Protein sequence
MSTDDTRRTH VKGRITLRGE HVPITTTDER LLATDHSSSW VHQDPWRVLR IQSEFVEGFG 
ALAGLGPAVS VFGSARIKAG EPEYELAEQV ARELVRAGYA VITGGGPGLM EAANRGAHEE
GGTSVGLGIE LPFEQGMNEW VDLGVDFRYF FARKTMFVKY AEGFIVLPGG FGTFDELFEA
MTLVQTKKVR GFPIVLVGTD YWGGLIDWLR GTVLERGLIS PPDLELLQLV DDPADAVRLV
VDAGNDLFAA EDSAARDAAE GAD