Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_2873 |
Symbol | |
ID | 7860404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 3207428 |
End bp | 3208336 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643866970 |
Product | DNA-formamidopyrimidine glycosylase |
Protein accession | YP_002882880 |
Protein GI | 229821354 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0469723 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGTCGCA TGCCAGAGCT GCCGGAGGTC GACGCTCTCG GCGAGTTCCT GCGGGAACGC GTCGTGGGGC GCGAGATCGT CGCCGTCCAC ATCGCCCAGA TCGGCGCCCT GAAGACGTTC GACCCGCCGC TCACCGACCT GGTCGGGCGC ACCGTCACCG GCGTGGAGCG GCACGGGAAG TGGCTCGACC TCGCGCTCGG GCGGCGCGGC GATGCCGATG ACGGCGAACC GCACCTCGTC TTCCACCTCG CCAAGGCGGG ATGGTTGCGC TGGAAGGACG AGATGCCGCC CGCGTCCACG CCCGCGGGTC GTCCCATGGG CCGGCGCGCG GGGCCGCTCG CGCTGCGGGT GTGGCTCGAC GACGGCGCCG GCTTCGACCT CACGGAGGCC GGCACGCGCA AGCGGCTCGC CGTGCACGTG GTCGGCTCGC CGGAGGAGGT CGGACCGATC GCGAGCCTCG GCTTCGACCC TCGCTCCGAG CTGACCGCCG AACGCCTGGG GGCGGCGCTG CGGACGCGCA ACCAGCAGCT GAAGGGCGCC CTGCGGGACC AGACGCTGGT CGCCGGGATC GGCAACGCCT ACTCGGACGA GATCCTGCAC GCGGCGCGGA TGTCCCCGTT CACGCTGACG AAGTCGCTGA CGGACGACGA CGTCGCTCGC CTCACGGACG CGACCCGCCA GGTGCTCGAC GCCGCCGTCG CGGCCGCGAG CGGGAAGCCG GCGGCCGAGC TCAAGGACGC GAAGCGCCGA GGCATGGCCG TCCACGGGCG GACCGGCGAG ACGTGCCCGG TGTGCGGCGA CGTCGTCCGC GAGGTCTCCT TCGCGGACCG CAGCCTGCAG TACTGCGCCA CGTGCCAGAC CGGCGGCGTG CCCCTGGCGG ACCGCAGGAT GTCGAAGCTC CTGCGCTAG
|
Protein sequence | MGRMPELPEV DALGEFLRER VVGREIVAVH IAQIGALKTF DPPLTDLVGR TVTGVERHGK WLDLALGRRG DADDGEPHLV FHLAKAGWLR WKDEMPPAST PAGRPMGRRA GPLALRVWLD DGAGFDLTEA GTRKRLAVHV VGSPEEVGPI ASLGFDPRSE LTAERLGAAL RTRNQQLKGA LRDQTLVAGI GNAYSDEILH AARMSPFTLT KSLTDDDVAR LTDATRQVLD AAVAAASGKP AAELKDAKRR GMAVHGRTGE TCPVCGDVVR EVSFADRSLQ YCATCQTGGV PLADRRMSKL LR
|
| |