| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2834 |
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| Symbol | |
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| ID | 7860365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 3163968 |
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| End bp | 3165326 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643866931 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_002882841 |
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| Protein GI | 229821315 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00451533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCACC GATCACAGCT CGGACGCCGC ACGTTCCTGG GCGGCGCCGG CGTCGCCGCA
GCAGCCGCCA GCCTGTCAGC GTGCAACCTC GCGGGCGGAG GCAGCGGAGG CGGAGGCGGG
GGCGGCGGAG GCGGGGGCGG AGGCGGAGGT GCCACCCTGA ACGTCTGGGG CGGCGTGCCG
AACGAGACCG GCCCGGACGA CCTGTGCGCC GCGTTCATGG ACGAGTTCCC CGACATCCAG
GTGACCTACA CCCGGTACGT CAATGACGAG GACGGCAACC TCAAGCTCGA CACGTCCTTG
ACCGGCGGCG CGGGCATCGA CGTGTTCTTC AGCTACAACC CGGCGCGCCT GTTCCAGCGC
GCCGACGCCG GGCTCGCGAT CGACCTGACC GACAAGATCG CCGCCGAGGA CGACTTCGCG
GAGTTCAGGG CGGACGCCGA CCCGGCCGCG AACTACGTCC GGGACGGCCA GGTGTTCGCG
ATCCCGGCCG CCCGCGCACC CGCGCACGTG TACATCAACA AGCAGATGCT GGACGCCGCC
GGCATCACCC TCGGCGCGAC CTGGACCGTC GAGGAGTTCG TCGACGTCGC CCGGCAGCTG
ACCGGCGACG GTGTGTTCGG CACGCTCAAC TACCCGTCGC AGGCCCGGGT GTTGCTCGGA
CCGGACTACC GCTACGCGGA CGACGGCGCC CGGACCAACT TCGCCGACCC GTGGTTCGCC
ACCGAGCTCG AGCTGGGACT CGCGCTGCAG GCCGAGGGCG TGCAGATGGA CCAGCAGACG
ATCATCGCCG AACAGCTCCA GACCTTCAGC CAGAACCCGT ACATCGCCGG CCGCGTGGCG
ATGCTGATCG CGTCCGGTCA GATCATCCGC TCGATCAACG ACACGAACGA GTACCCGCAC
GACTTCCAGA CGTACTGCAT GCCGCTCCCG ACGCCGGACC CGAGCATGAC GGCGTGGAAC
ACCGGGCAGC GCGGCGACCT GATCTCGATC AACCCGGAGT CGGACTACCA GGACGAGGCG
TGGGAGCTGG CGAAGTTCTG GATGCGGAAC GCCGCGCAGT TCATGACCCG AGGCGGCCGT
CTCCCGGCAC TGGTGGGCGA CACCAGCGAG GACCAGATCC TGGCCGACCT GCTCAGCGAG
AACGCCGAGG AGCTGTACGA CGTCGAGTCG TGGCGCTCGA TGCTGTTCAG CCCCGACCTC
ATCCTCCCGG TCGACTCCAT CTTCACCGCG GGCACCCAGC TCGACCAGAT CACACTGACC
CTGACCGACG AGGTGCTGCT CGGCGACCGC ACCGTCGAGT CGTGGGTCAC GGAGGCTGTG
GCGCAGGGGG ACGCCGCGAT CGCGAACGGC GGGGCGTGA
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| Protein sequence | MTHRSQLGRR TFLGGAGVAA AAASLSACNL AGGGSGGGGG GGGGGGGGGG ATLNVWGGVP
NETGPDDLCA AFMDEFPDIQ VTYTRYVNDE DGNLKLDTSL TGGAGIDVFF SYNPARLFQR
ADAGLAIDLT DKIAAEDDFA EFRADADPAA NYVRDGQVFA IPAARAPAHV YINKQMLDAA
GITLGATWTV EEFVDVARQL TGDGVFGTLN YPSQARVLLG PDYRYADDGA RTNFADPWFA
TELELGLALQ AEGVQMDQQT IIAEQLQTFS QNPYIAGRVA MLIASGQIIR SINDTNEYPH
DFQTYCMPLP TPDPSMTAWN TGQRGDLISI NPESDYQDEA WELAKFWMRN AAQFMTRGGR
LPALVGDTSE DQILADLLSE NAEELYDVES WRSMLFSPDL ILPVDSIFTA GTQLDQITLT
LTDEVLLGDR TVESWVTEAV AQGDAAIANG GA
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