Gene Bcav_2710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2710 
Symbol 
ID7860148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3011693 
End bp3012385 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content75% 
IMG OID643866807 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_002882717 
Protein GI229821191 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.248821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.606697 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGCG CGGAGCCGCA GACCCCGATC CGGCTGCTCG TGGCGGACGA CCAGCCGACG 
ATCCGGCTCG GCCTGCGCAT GATCCTCGAC AACGAGCCCG ACCTCACGGT CGTGGCCGAG
GCGGACGACG GCGAGGCCGC CGTCGCCGCG GCCCGCGAGC TGCGCCCGGA CGTCGTCCTC
ATGGACGTCC GCATGCCACG CGTCGACGGC ATCCAGGCGG CCGCGCGCCT CACCGCCGAC
CCCGAGCTGG CCGGCGTGCG CACGATCGTG CTCACCACGT TCGACGACGA CGCGTACGTG
TACGGCGCGC TCCGTGCGGG CGCGGCCGGC TTCCTCCTCA AGGACGTCGG GCCGGACGCG
CTCGTCGACG CCGTCCGTCG CGTGCACGCC GGCGACTCGC TGCTCGACCC GAGCGTCACG
CGGCGCGTGA TCGAGCGGTA CGTCGAGCTC GCCGACGCCG CGCCCGTCCT CCCGGGCGCC
GCGGCCGCCG CTCGCCTCAC GCGTCGCGAG CACGAGGTGC TCCTCGCCGT CGCGCGGGGC
AGCTCGAACC GGGAGATCGG TGCCGCGCTC GACGTGTCCG AGGCGACGGT CAAGAGCCAC
GTCAGGTCGC TGCTCGCGAA GCTCGGGCTG GCGAGCCGGG TCCAACTCGT GATCTTCGCG
TACTCCGAGG GCCTGGTCAG CGCGCGCCGG TGA
 
Protein sequence
MTGAEPQTPI RLLVADDQPT IRLGLRMILD NEPDLTVVAE ADDGEAAVAA ARELRPDVVL 
MDVRMPRVDG IQAAARLTAD PELAGVRTIV LTTFDDDAYV YGALRAGAAG FLLKDVGPDA
LVDAVRRVHA GDSLLDPSVT RRVIERYVEL ADAAPVLPGA AAAARLTRRE HEVLLAVARG
SSNREIGAAL DVSEATVKSH VRSLLAKLGL ASRVQLVIFA YSEGLVSARR