Gene Bcav_2699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2699 
Symbol 
ID7861585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3000869 
End bp3002134 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content73% 
IMG OID643866796 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_002882706 
Protein GI229821180 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.88946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.681606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAGCC CGCGGATCGC CGACGTCCGC GCGACCACCG TGACGGTGCC CCTGGCGGCG 
CCGCTGCGGC ACAGCAACGG CGCGCACTGG GGTCGGTTCG TACGGACGAT CGTCGAGGTC
ACCACGGACT CCGGGATCGT CGGGGTCGGC GAGATGGGCG GTGGGGGCCA GAGCGCCGAG
GCCGCGATCG CCGCGCTGCG CGAGTACCTC GTGGGGCACG AGGTGGCGCG CACCGAGGCG
CTGCGCTTCA TGATCGCGAA CCCGACGGCG AGCCTGTACA ACAACCGCAC CCAGCTGCTC
GCGGCCATCG AGTTCGCGTG CCTCGACGCG CTCGGCAAGC ACGCCGGGCT GCCCGTGCAC
GACCTGCTCG GCGGCCGCGT CCGCGACGAG GTGGAGTTCG CCTCCTACCT CTTCTTCCGG
TACCCGGGGC CGGACGGGAC CGGGGAGGTG CGCACTCCCG AGCAGCTCGT CGCGCACGCG
CGCGACCTGC GCGAGCGTCA CGGGTTCCGC GTGCACAAGC TCAAGGGAGG GGTCTTCCCG
CCCGACTACG AGCTCGCCTG CTACCGGGCG CTCGCCGAGG AGTTCCCGGA CGACCGGTTC
CGGTACGACC CCAACGGCGC GCTGGGGGTC GAGGAGGCGG TGCGGTTCGC GAAGGCCGTC
GAGGACCTGC CGAACGACTA CCTCGAGGAC CCCACCTGGG GGCTCAACGG ACTGCGCCGG
GTCCGGGAGA AGACCACGCT GCCGATCGCG ACGAACACCG TCGTCGTCAA CTTCGAGCAG
CTCGCGACGA ACGTGCGGGA CGCCGCCGTC GACGTCGTGC TCCTCGACAC GACGTTCTGG
GGCGGCATCC GGCCGTGCCT GCGGGCGGCG GCCGTGTGCG AGACCGTGCA GACCTCCGTC
GCCGTGCACT CCTCGGGCGA GCTCGGCATC CAGCTCGCCA CGATGCTCCA CCTGGGGGCC
GTGCTGCCGA ACCTCGTCTT CGCGGCCGAC GCGCACTACC ACGAGCTCGT CGACGACGTG
ATCGTCGGGG GGAAGGTGCC GTACGTCGGC GGGCGGATCG CCGTGCCCGA CGCACCCGGG
CTCGGCGTGG AGCTCGACGA GGACAAGGTC GCGGAGTACG CGGCGCTGTA CCGCGAGCTC
GGCCCGTACG CGTACGACCG TGACCCCGGC CGGCCGGACT GGTACCCGCT GCTGCCGAAC
ACCGAGTTCG CCGACCCGGA CGACGACGGC GTTCCCGAGG CGCTCGGGTA CGCGCGGGCG
CGCTGA
 
Protein sequence
MSSPRIADVR ATTVTVPLAA PLRHSNGAHW GRFVRTIVEV TTDSGIVGVG EMGGGGQSAE 
AAIAALREYL VGHEVARTEA LRFMIANPTA SLYNNRTQLL AAIEFACLDA LGKHAGLPVH
DLLGGRVRDE VEFASYLFFR YPGPDGTGEV RTPEQLVAHA RDLRERHGFR VHKLKGGVFP
PDYELACYRA LAEEFPDDRF RYDPNGALGV EEAVRFAKAV EDLPNDYLED PTWGLNGLRR
VREKTTLPIA TNTVVVNFEQ LATNVRDAAV DVVLLDTTFW GGIRPCLRAA AVCETVQTSV
AVHSSGELGI QLATMLHLGA VLPNLVFAAD AHYHELVDDV IVGGKVPYVG GRIAVPDAPG
LGVELDEDKV AEYAALYREL GPYAYDRDPG RPDWYPLLPN TEFADPDDDG VPEALGYARA
R