Gene Bcav_2676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2676 
Symbol 
ID7861561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2973580 
End bp2974350 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content72% 
IMG OID643866772 
Productphosphonate ABC transporter, inner membrane subunit 
Protein accessionYP_002882683 
Protein GI229821157 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3639] ABC-type phosphate/phosphonate transport system, permease component 
TIGRFAM ID[TIGR01097] phosphonate ABC transporter, permease protein PhnE 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0566744 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCCGC GCAAGCCCCG CCCGCGCTGG ACGACGTACG CGGCTGTCGT CGTCGTCGCC 
GCCCTCACGC TCTGGTCGGC GCGCGGTGTC GAGTTCACGC TCGAGCCGCT GCTCGCCAAC
TACGACCGGG GCGTGGACGT GCTGCGGCGG TTCCTGCACC CGGACTGGGC GTTCGTCTGG
GCGAGCTGGC CGGCCTGGGC CGAGACGCTG CAGGTCGCCG TGCTCGCAGC CACGGTGGGC
TGCGCGATCG CGCTCGTCCT CGCGCTGCTC GCGAGCCAGG TGACCGCATC GCCGTGGGTG
TACCGGACGG TGAAGATCGT CCTCGCGGTG CAGCGGTCGC TCCCCGATGT CGCGTGGGCG
CTGCTCGCCG TCGCCGTCGT GGGCGTCGGA CCGCTCGCGG GTCTGCTGGC GCTCGTGGCG
TTCAACATCG GGGTGGCGGC GAAGCTCACC GCGGAGAGCA TCGACGCCGT CGACCCCGGC
CCTGTCGAGG CCGCGCGGGC CGTCGGCGCC GACCCGGTGC AGCGGGCGAC GACGGCGGTC
GTCCCGCAGG TCATGCCGAA CTTCCTCTCG TACTGCTTCT ACGTGTTCGA GCTCAACATC
CGGGCCTCCC TCGTCCTCGG GGCGGTCGGG GCCGGCGGGA TCGGCACGGT CATCATCGTG
CAGACGAGCC GGTTCCAGTT CGAGAACGTG GCGGGCATCA TCTACGTCTT CGTGCTCGTC
GTGTTCGTTC TCGACCAGCT CTCGCGGTGG CTCCGCCGGA GGCTGATATG A
 
Protein sequence
MRPRKPRPRW TTYAAVVVVA ALTLWSARGV EFTLEPLLAN YDRGVDVLRR FLHPDWAFVW 
ASWPAWAETL QVAVLAATVG CAIALVLALL ASQVTASPWV YRTVKIVLAV QRSLPDVAWA
LLAVAVVGVG PLAGLLALVA FNIGVAAKLT AESIDAVDPG PVEAARAVGA DPVQRATTAV
VPQVMPNFLS YCFYVFELNI RASLVLGAVG AGGIGTVIIV QTSRFQFENV AGIIYVFVLV
VFVLDQLSRW LRRRLI