| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2672 |
|---|
| Symbol | |
|---|
| ID | 7861557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 2970879 |
|---|
| End bp | 2971355 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643866768 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_002882679 |
|---|
| Protein GI | 229821153 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0774558 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAAGC TCGCCGTCGG CGACGTCGCC CCCGACTTCA CGCTCCCGGC CGCCGGCGGC
GGTGACGTGT CCCTCGCGAG CCTGCGCGCG GACGCCGAGA AGGGCGTCAT CGTGTACTTC
TACCCCGCGG CGGGCACCCC GGGCTGCACG ACGCAGGCGT GCGACTTCCG CGACTCGCTC
GCCTCGCTGC AGGGGGCGGG CTACGCCGTC GTCGGCCTCT CCCCCGATAC CGTGGGGGCC
CTCGAGAAGT TCGCCGACGC CGAGTCGCTC ACGTTCGCGC TCGGGTCCGA CCCCGGCCAC
GCCGTGCTCG AGGCCTACGG CGCCTGGGGC GAGAAGACCC TCTACGGCAA GACCGTCGTC
GGGGTCATCC GCTCCACGAT CGTCGTCGCC CCGGACGGGA CCGTGTCGCT CGCCCAGTAC
AACGTGAAGG CGACCGGCCA CGTGGCGAAG CTGCGCCGCG ACCTCGGGAT CGACTGA
|
|---|
| Protein sequence | MPKLAVGDVA PDFTLPAAGG GDVSLASLRA DAEKGVIVYF YPAAGTPGCT TQACDFRDSL
ASLQGAGYAV VGLSPDTVGA LEKFADAESL TFALGSDPGH AVLEAYGAWG EKTLYGKTVV
GVIRSTIVVA PDGTVSLAQY NVKATGHVAK LRRDLGID
|
|---|
| |