Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_2565 |
Symbol | |
ID | 7860732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 2851607 |
End bp | 2852194 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643866656 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002882572 |
Protein GI | 229821046 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.908518 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0361185 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAGG GCGAGGCGAC GCGCGGGGCG ATCCTCGACG TCGCCGTGGC CACCGCGTAC CGCGTCGGGC TCGGTGGGCT GACGATCGGC GAGCTGGCCC GCACGGCTGA CATGTCCAAG AGCGGGCTGT ACGCGCACTT CCGGTCGAAA GAGGCCCTCC AGCTCGCCGT TCTCGACGCC GCTCGGCGCA GGTTCGTGGA CCGCGTGGTG CGCCCCGCGC TCGCCACGCC GCGGGGAGAG GCGAGGCTGC GCGAGCTGGT CGACCGCTGG CTCGCCGCCG GCCTGTCCCG CGAGCCGGGA TGCTCGCTGT TCGTGAAGGC GAGCACGGAG CTGGACGAGC AGGAGGGCCC GGTGCGCGAC GCGCTGACCG CCGACCACCG CGACCTGCTC GACACGATCG CGCAGGTCTT CCGCACGTGC GTCGCCGAGG GCGACGTGGC CGAGGACGCC GACCCGGACC AGTTCGCGAC CGACCTCGAC GGCATCATGC TCGCGTTCTA TCACGCGCAC CGGCTCCTGC GGGATCCGGA CGCGGAGCTC CGGGCGCGGC GCGCGTTCGA GAACCTGCTC GCCGCCGCTC GTCCCTGA
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Protein sequence | MSKGEATRGA ILDVAVATAY RVGLGGLTIG ELARTADMSK SGLYAHFRSK EALQLAVLDA ARRRFVDRVV RPALATPRGE ARLRELVDRW LAAGLSREPG CSLFVKASTE LDEQEGPVRD ALTADHRDLL DTIAQVFRTC VAEGDVAEDA DPDQFATDLD GIMLAFYHAH RLLRDPDAEL RARRAFENLL AAARP
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