| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2510 |
|---|
| Symbol | |
|---|
| ID | 7857802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 2804003 |
|---|
| End bp | 2805445 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643866606 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002882522 |
|---|
| Protein GI | 229820996 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.563077 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGACA ACACGGCACC TGCGACCGCG GGGCCAGCCA CGGCGGGCGA TCCCGCCGAG
CGCCCGGACC CTCGCCGCTG GCGGATCCTC TGGCTCGTCG GCATCGCCCA GCTCATGCTC
ATCCTCGACG TCACGGTGGT CGCGATCGCC CTGCCGCACC TGGCGACCGA CCTCGGACTC
GACCGGGCGA CACTCACCTG GGTCGTCAGC GGCTACACGC TCGCGTTCGG CGGGCTCCTG
CTCCTCGGTG GGCGTGCGGC GGACCTGTTC GGCGCGCGCC GCCTCGTGCT CCTCGGCCTG
GGTCTCTTCG CGCTCGCCTC TCTCGTGGCG GGCCTCGCGT CCTCGGGGCC GATGCTGCTC
GGTGGCCGGC TGGCGCAGGG CCTCGCCGCG GCGATCCTCT CCCCCGCTGC GCTCTCCGTC
GTGGTGACGA CGTTCGAGGG GGACGAACGC AACCGGGCCC TCGGCATCTG GTCGGCGCTC
GGCGGGAGCG GCGCCGCGCT CGGCGTCCTG CTCGGCGGCG TGCTCACGGC CGGTCCCGGC
TGGCCCTGGG TCTTCATCGT GAACGTGCCG GTCGGCATCG TCCTGCTCCT CACACTGCGT
ACGCACCTCC CAGCACACCC CCGTCCGGCG GCGGGTGGGC GACTCGACGT GCTCGGGGCC
GCTCTGGTCA CGGCGGCCAC GGGTTCCCTC ATCTACGCGC TCGTCCAGGC GGGCGACGGC
GGATGGGCGA CACCGACGAC CGCCGCCTTC CTGCTCGCTG CCCTCGTGCT CTACGGCGGT
TTCGTCGCCC GTCAGCTGAC GGCCACGAGC CCGCTGATGG ATCTCCGGCT TCTGACGCGG
CGACCGGTCG CGACGGGCAC GGTGCTGATC CTGGTCGCGA CTGCGCTCAT GATCATGGTG
TTCTTCCTCG GGACGTTCTT CCTGCAGCAC CACCAGAGCT ACGGGCCACT GGTCACCGGC
CTGCTGTTCC TCCCGGTGGC GATCGCCACG ATGGTCGGTG CGAACGTGGC CGGGCGCGTG
CTCGGTCGTG TCGGGCCTCG GTTGCTCGGC GTGGTCGGCC TGCTGGTCGC GGCTGCCGGG
ATGTCCGTGC CCGCGATGTG GGAGGGCACG ACGGCGATGG TCGTCGGGGT CTCCGTCGCC
GCCGCCGGGA CCGGCATCGC GTTCGTCGTC GCCTCGGCGA CGGCGCTCGG CCAGGTCGAG
CCGCAGGAAG CCGGCCTGGC CTCGGGGATC GTCAGCACGT TCCACGAGTT CGGGGCGTCG
GTCGGCGCGG CCCTCGCCTC CAGCGTGGCT GCCGCGAGCC TCGTGGGACC GGGATCGGGC
ACCAGCACGG TGGGCTTCGA CCGTGGCTTC ACGACCGGTG CCGTCATCGC GGTGGTCGCC
GCGCTCGTCA CGCTCGTCAT CACACCGAGC ACACGCAGGG TGGGGGCGGG ACGGCGACGC
TGA
|
|---|
| Protein sequence | MSDNTAPATA GPATAGDPAE RPDPRRWRIL WLVGIAQLML ILDVTVVAIA LPHLATDLGL
DRATLTWVVS GYTLAFGGLL LLGGRAADLF GARRLVLLGL GLFALASLVA GLASSGPMLL
GGRLAQGLAA AILSPAALSV VVTTFEGDER NRALGIWSAL GGSGAALGVL LGGVLTAGPG
WPWVFIVNVP VGIVLLLTLR THLPAHPRPA AGGRLDVLGA ALVTAATGSL IYALVQAGDG
GWATPTTAAF LLAALVLYGG FVARQLTATS PLMDLRLLTR RPVATGTVLI LVATALMIMV
FFLGTFFLQH HQSYGPLVTG LLFLPVAIAT MVGANVAGRV LGRVGPRLLG VVGLLVAAAG
MSVPAMWEGT TAMVVGVSVA AAGTGIAFVV ASATALGQVE PQEAGLASGI VSTFHEFGAS
VGAALASSVA AASLVGPGSG TSTVGFDRGF TTGAVIAVVA ALVTLVITPS TRRVGAGRRR
|
|---|
| |