Gene Bcav_2448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2448 
Symbol 
ID7861982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2737597 
End bp2738649 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content68% 
IMG OID643866544 
ProductrecA protein 
Protein accessionYP_002882460 
Protein GI229820934 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02012] protein RecA 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.276179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.953449 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCTC CGGTCGGAGA CAAGTCCAAG GCCCTCGAGG CCGCACTCGG TCAGATCGAC 
CGTCAGTTCG GGAAGGGCTC GGTGATGCGC CTCGGCGACG ACACGCGCCC ACCCGTCGAA
GTCATCCCCA CGAGCTCGAT CGCGCTCGAC GTCGCGCTCG GGATCGGCGG CCTCCCACGA
GGCCGCGTCG TCGAGATCTA CGGTCCGGAG AGCTCCGGCA AGACGACCGT CGCGCTGCAC
GCCGTCGCGA ACGCCCAGCG ACTGGGCGGC ATCGCCGGCT TCATCGATGC CGAGCACGCG
CTCGACCCGG AGTACGCCAA GAGGCTCGGT GTCGACACCG ACGCGCTTCT CGTGTCGCAG
CCGGACACCG GCGAGCAGGC GCTCGAGATC GCCGACATGC TCATCCGGTC CGGCGCGCTC
GACATCGTCG TCATCGACTC CGTCGCGGCG CTCGTGCCGA AGGCGGAGAT CGAGGGCGAG
ATGGGGGACT CGCACGTCGG CCTCCAGGCG CGCCTCATGT CGCAGGCGCT GCGCAAGATC
ACCGGCGCCC TGTCGGCGTC GGGCACGACG GCGATCTTCA TCAACCAGCT CCGCGAGAAG
ATCGGTGTCT TCTTCGGTTC GCCCGAGACG ACGAGCGGCG GCAAGGCGCT GAAGTTCTAC
GCGTCCGTCC GGCTCGACGT GCGGCGTATC GAGACCCTCA AGGAGGGCAC GGACGCGGTC
GGCAACCGGA CGCGCGTCAA GGTCGTGAAG AACAAGATGG CCCCGCCGTT CAAGCAGGCG
GAGTTCGACA TCCTGTACGG ACACGGCATC TCTCGCGAGG GCGGGCTCAT CGACCTCGGC
GTTGACCAGG GCATCGTCCG CAAGTCCGGC GCCTGGTACA CGTACGAAGG CGACCAGCTC
GGTCAGGGCA AGGAGAACGC CCGCAAGTTC CTCAAGGACA ACCCCGAGCT CGCGGACGAG
ATCGAGACGC GGATCAAGGA GAAGCTCGGC ATCGGGATCA AGGTTCCGGC CGACGCCTCG
GAGCTCGACG ACGTGGCACC TGTCGACTTC TGA
 
Protein sequence
MPAPVGDKSK ALEAALGQID RQFGKGSVMR LGDDTRPPVE VIPTSSIALD VALGIGGLPR 
GRVVEIYGPE SSGKTTVALH AVANAQRLGG IAGFIDAEHA LDPEYAKRLG VDTDALLVSQ
PDTGEQALEI ADMLIRSGAL DIVVIDSVAA LVPKAEIEGE MGDSHVGLQA RLMSQALRKI
TGALSASGTT AIFINQLREK IGVFFGSPET TSGGKALKFY ASVRLDVRRI ETLKEGTDAV
GNRTRVKVVK NKMAPPFKQA EFDILYGHGI SREGGLIDLG VDQGIVRKSG AWYTYEGDQL
GQGKENARKF LKDNPELADE IETRIKEKLG IGIKVPADAS ELDDVAPVDF