| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2439 |
|---|
| Symbol | |
|---|
| ID | 7861973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 2729805 |
|---|
| End bp | 2730737 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643866535 |
|---|
| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| Protein accession | YP_002882451 |
|---|
| Protein GI | 229820925 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.445359 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.847034 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGGATCA TCGCGATCGT CGGACCGACG GCCACGGGCA AGAGCGAGCT CGCGCTCGAC
CTCGCGGACG CGCTGCGGGC CGAGGGCTCC AGCGCGGAGC TGACGAACGC CGACGCGATG
CAGCTCTACC GCGGGATGGA CGTCGGCACG GCGAAGACGC CGCCCACCCA GCGCCGCGGC
GTGCCGCACC ACCAGCTCGA CGTCCTCGAC GTCACCCAGG AGGCGAGCGT CGCGGCCTAC
CAGACGCACG CCCGAGCGGA TCTCGCCGCT GTCCGTGCCC GTGGCGCGTG GCCGCTGCTC
GTCGGCGGTT CGGGCCTGTA CGTGCGGTCG GTGCTCGACG ACCTGACGTT CCCCGACACC
GACCCGGCCG TGCGCCGCGA CCTGGAGGAA CGCGGTGAGC GCCTCGGGCC CGGCCTGCTG
CACGACGAGC TCGCCCGTGT CGATCCGCTC GCGGCGCAGC GGATCGGCCG GCACAACCTC
CGGCGTCTCG TGCGCGCGCT CGAGGTGATC GCGCTCACCG GCGAGCCCTA CTCCGCGAAC
CTGCCGGACC ACACGTACGC GCTCGACGCC GTCCAGCTCG CGATCCGCGT GGAGCGCGCC
GAGCTCGACG AGCGGATCCA CGCCAGGACG GCCGCGATGT TCACCGGTGG GCTGCTCGAG
GAGACGCGGG ACCTGCTCGA CCACGGGCTG GAGCGCGGGG TGACGGCGTC CCGCGCCGTC
GGCTACGCGC AGGCGATCGA CGTCGTGCGC GGTCGGCTGC ACCTCGAGGA CGCCGTGGCG
GCTGCCGCCG TCGCCACCCG ACAGGTCGCC CGCCGGCAGG ACAAGTGGTT CCGGCGCGAC
CCCCGCGTCC GCTGGCTCGA CCCCGAGGGT GATCTCCTCG CCCAGGCGCG TGCCGTCGTC
GAGAGCGCAC CGGGAAGCGG TGCCGGCACG TAG
|
|---|
| Protein sequence | MRIIAIVGPT ATGKSELALD LADALRAEGS SAELTNADAM QLYRGMDVGT AKTPPTQRRG
VPHHQLDVLD VTQEASVAAY QTHARADLAA VRARGAWPLL VGGSGLYVRS VLDDLTFPDT
DPAVRRDLEE RGERLGPGLL HDELARVDPL AAQRIGRHNL RRLVRALEVI ALTGEPYSAN
LPDHTYALDA VQLAIRVERA ELDERIHART AAMFTGGLLE ETRDLLDHGL ERGVTASRAV
GYAQAIDVVR GRLHLEDAVA AAAVATRQVA RRQDKWFRRD PRVRWLDPEG DLLAQARAVV
ESAPGSGAGT
|
|---|
| |