Gene Bcav_2385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2385 
Symbol 
ID7858938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2673160 
End bp2673738 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content69% 
IMG OID643866481 
Producttranslation initiation factor IF-3 
Protein accessionYP_002882397 
Protein GI229820871 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.157849 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.289584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGAGG TGCGTCTGGT CGGCCCCAAC GGTGAGCAGG TCGGCATCGT TCGGGTCGAG 
GACGCCCTCC GCCTGGCGGA GGAGGCCGAC CTCGACCTGG TCGAGGTGGC CCCGGACGCC
CGACCCCCCG TCGCCAAGCT CATGGACTTC GGGAAGTTCA AGTACGAGTC GGCGATGAAG
GCCCGCGACG CCCGTCGCAA CCAGGCCAAC ACCGTGCTCA AGGAGATCCG TTTCCGGCTG
AAGATCGACC CGCACGACTA CGGCACGAAG AAGGGCCACG TCGAGCGGTT CCTCACCGCC
GGGGACAAGG TCAAGGTCAT GATCATGTTC CGTGGCCGTG AGCAGTCCCG TCCGGAGATG
GGCATGCGCC TGCTGCAGCG GCTGGCCGAC GACGTCGCCG AGCTCGGTCA CGTCGAGTCG
ACACCGCGCC TGGACGGCCG GAACATGACG ATGGTCATCG CGCCGCACCG CAAGAAGGCC
GAGGCACGCG ACGACGCCCG CCGCGAGAAG GAGCGGCGTC GCGTCGAGGA GGGTGACAGC
GCCGACGAGG CGCCGCAGAC CTCCGCCCCC ACGAGCTGA
 
Protein sequence
MPEVRLVGPN GEQVGIVRVE DALRLAEEAD LDLVEVAPDA RPPVAKLMDF GKFKYESAMK 
ARDARRNQAN TVLKEIRFRL KIDPHDYGTK KGHVERFLTA GDKVKVMIMF RGREQSRPEM
GMRLLQRLAD DVAELGHVES TPRLDGRNMT MVIAPHRKKA EARDDARREK ERRRVEEGDS
ADEAPQTSAP TS