Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_2385 |
Symbol | |
ID | 7858938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 2673160 |
End bp | 2673738 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643866481 |
Product | translation initiation factor IF-3 |
Protein accession | YP_002882397 |
Protein GI | 229820871 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.157849 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.289584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCCGAGG TGCGTCTGGT CGGCCCCAAC GGTGAGCAGG TCGGCATCGT TCGGGTCGAG GACGCCCTCC GCCTGGCGGA GGAGGCCGAC CTCGACCTGG TCGAGGTGGC CCCGGACGCC CGACCCCCCG TCGCCAAGCT CATGGACTTC GGGAAGTTCA AGTACGAGTC GGCGATGAAG GCCCGCGACG CCCGTCGCAA CCAGGCCAAC ACCGTGCTCA AGGAGATCCG TTTCCGGCTG AAGATCGACC CGCACGACTA CGGCACGAAG AAGGGCCACG TCGAGCGGTT CCTCACCGCC GGGGACAAGG TCAAGGTCAT GATCATGTTC CGTGGCCGTG AGCAGTCCCG TCCGGAGATG GGCATGCGCC TGCTGCAGCG GCTGGCCGAC GACGTCGCCG AGCTCGGTCA CGTCGAGTCG ACACCGCGCC TGGACGGCCG GAACATGACG ATGGTCATCG CGCCGCACCG CAAGAAGGCC GAGGCACGCG ACGACGCCCG CCGCGAGAAG GAGCGGCGTC GCGTCGAGGA GGGTGACAGC GCCGACGAGG CGCCGCAGAC CTCCGCCCCC ACGAGCTGA
|
Protein sequence | MPEVRLVGPN GEQVGIVRVE DALRLAEEAD LDLVEVAPDA RPPVAKLMDF GKFKYESAMK ARDARRNQAN TVLKEIRFRL KIDPHDYGTK KGHVERFLTA GDKVKVMIMF RGREQSRPEM GMRLLQRLAD DVAELGHVES TPRLDGRNMT MVIAPHRKKA EARDDARREK ERRRVEEGDS ADEAPQTSAP TS
|
| |