Gene Bcav_2366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2366 
Symbol 
ID7858919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2654479 
End bp2655909 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content75% 
IMG OID643866462 
Productargininosuccinate lyase 
Protein accessionYP_002882378 
Protein GI229820852 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0165] Argininosuccinate lyase 
TIGRFAM ID[TIGR00838] argininosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.23929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0035121 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGAGCACGC CGGGCACGGG CGAGGGACAG CTCTGGGGCG GCCGGTTCGC GGGCGGGTCC 
GCCGACGCGC TGGCGGAGCT CAGCCGCAGC ACGCAGTTCG ACTGGGTGCT GGCGCCGTAC
GACCTCGCGG GCTCGCGCGC CCACGCCCGG GTGCTGCGCA CGGCCGGCCT GCTGTCCGCC
GTCGAGCTGG CCACGATGAT CGAGGGTCTG GACGCGCTGG AGGCCGACGT GCTCTCCGGC
GCGTTCGTGC CCGGACCGCA CGACGAGGAC GTGCACGGGG CGCTCGAGCG CGGCCTCATC
GAGCGGATCG GCACCGAGGT CGGGGGGAAG CTCCGCGCGG GGCGGTCGCG CAACGACCAG
ATCGCGACCG AGGTGCGCAT GTTCCTGCGC GATCACGCCC GGACCGTGGC GGGCGGGGTG
CTCGACGTCG TCGACGCGCT CGTCGACCAG GCGGCCGCGC ATCCGCAGGC GCCGATGCCG
GGGCGCACGC ACCTGCAGCA CGCGCAGCCC GTGCTCCTCG CGCACCACCT GCTGGCTCAC
GCGTGGCCGC TGCTGCGGAA CGTGGGCCGG CTCGTCGACT GGGACGTCCG GGCCGCGGTG
TCGCCGTACG GGTCCGGGGC GCTCGCCGGC TCGTCGCTCG GCCTCGACCC GCAGGCGGTG
GCCCGCGAGC TGGGCTTCGC CGACTCGGCG GAGAACTCGA TCGACGGGAC GGCGGCCCGC
GACGTCGTCG CCGAGTGCGC GTTCGTGCTC GCGATGACCG CCGTGGACCT GTCCCGCCTG
GCGGAGGACG TCATCATCTG GGCCACCAAG GAGTTCGGCT TCGTCACGCT CGACGACGCG
TACTCCACCG GGTCGAGCAT CATGCCGCAG AAGAAGAACC CGGACGTGGC GGAGCTCGCG
CGCGGCAAGG CGGGGCGCCT CATCGGCGAC CTCGCGGGGC TGCTGGCGAC GCTCAAGGGC
CTTCCGCTGG CCTACAACCG CGATCTGCAG GAGGACAAGG AGCCGGTGTT CGACGGCGTC
GCGCAGCTCG AGGTGCTGCT CCCCGCCGTC GCCGGCATGG TCGCCACGCT CCGGTTCGAC
ACCGACCGCA TGGCCGAGCT GGCCCCGCAG GGCTTCTCGC TCGCGACCGA CGTCGCGGAG
TGGCTCGTGC GGAACGGCGT CCCGTTCCGC GATGCGCACG AGATCGCCGG GGCCTGCGTG
CGGGCGTGCG AGGAGCACAC ACCGCCGATC GAGCTCTGGG ACCTCACCGA CGCCGAGCTG
GCCGGGATCA GTGACCACCT GACGCCGGAT GTGCGGTCCG TCCTCTCCGT GGAGGGGTCG
ATCGCCTCGC GGGCCGGGCG CGGCGGGACC GCGCCGGTGC GCGTCGTCGA GCAGCTCGCC
CGTGCGGGGG AGCGCTCGTC GGAGCTGCGG GCGTGGGCCG ACGGCGAGTG A
 
Protein sequence
MSTPGTGEGQ LWGGRFAGGS ADALAELSRS TQFDWVLAPY DLAGSRAHAR VLRTAGLLSA 
VELATMIEGL DALEADVLSG AFVPGPHDED VHGALERGLI ERIGTEVGGK LRAGRSRNDQ
IATEVRMFLR DHARTVAGGV LDVVDALVDQ AAAHPQAPMP GRTHLQHAQP VLLAHHLLAH
AWPLLRNVGR LVDWDVRAAV SPYGSGALAG SSLGLDPQAV ARELGFADSA ENSIDGTAAR
DVVAECAFVL AMTAVDLSRL AEDVIIWATK EFGFVTLDDA YSTGSSIMPQ KKNPDVAELA
RGKAGRLIGD LAGLLATLKG LPLAYNRDLQ EDKEPVFDGV AQLEVLLPAV AGMVATLRFD
TDRMAELAPQ GFSLATDVAE WLVRNGVPFR DAHEIAGACV RACEEHTPPI ELWDLTDAEL
AGISDHLTPD VRSVLSVEGS IASRAGRGGT APVRVVEQLA RAGERSSELR AWADGE