Gene Bcav_2311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2311 
Symbol 
ID7861923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2594459 
End bp2596546 
Gene Length2088 bp 
Protein Length695 aa 
Translation table11 
GC content70% 
IMG OID643866404 
ProductABC transporter related 
Protein accessionYP_002882324 
Protein GI229820798 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.28541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG AGCAACGGCC TCAGCAGGCT CCGAACGGCG CGACGTCGTC GGCCGCGGGC 
GACGACAGCA CCCCGGCGAA GACCGACGAC GCCGCCGTCA CGCGGAGCGC TCGTGCGGGC
GGACGCAGCG GCGGGCCCTG GGGCGGCATG GGCATGCCGG CGGAGAAGGC GCTCGACATG
CGGGGGACTC TGAGCCGCCT GCTCGGCGAC CTGCGCGACC ACAGAGTGGC GCTCGTGGGG
ATCATCGTGC TCGGTGTCCT GTCCGTGGCG CTGGCGGTGA TCGGGCCCAA GCTCCTCGGG
AACGCGACCA ACATCGTGTT CGCCGGGTTC CTCTCGCGGA ACCTGCCCGA CGGGATCACG
CGCGAGCAGG CGCTCGAAGG GCTGCGGGCG TCGGGGAACG ACCAGCTCGC CGACCTGCTG
GAGCCGCTCA ACTTCGTGCC GGGCGCCGGC GTCGACTTCC GGGCGCTCGC GATCATCCTC
GCCTGGGTGC TCGTGGTGTA CCTCGGGTCG TTCCTGTTCG GCTGGCTGCA GGCGCGCATC
ACGGCGATCG TCGTGCAGAC GTCGATGTAC CGGCTGCGCC AGCGCGTCGA GGCCAAGCTC
GGCCGCGTGC CGCTCAAGTA CTTCGACGGC CAGCCGCGCG GCGAGGTGCT GTCGCGGGTC
ACCAACGACA TCGACAACAT CGCCCAGACG ATGTCGCAGA CCCTGGCTCA GCTCATCACG
TCGGTGCTCA CCGTGATCGG CGTGCTCGTC ATGATGTTCG TGATCTCGCC GCTGCTCGCG
CTCATCGCGC TCGTGACCGT GCCGCTCTCG GCCCTCGTGA CGGCGCTCAT CGCGAAGCGC
TCGCAGCCGC AGTTCATCCG GCAGTGGCGC ACCACGGGTG AGCTGAACGG ACACATCGAG
GAGATGTACA CCGGTCACGC TCTCGTCAAG GTGTTCGGTC AGCAGCCGGC GGCGCAGCGC
ACGTTCGACG ACAAGAACGG CGAGCTGTAC GACGCATCGT TCAAGGCCCA GTTCATCTCG
GGCACGATCC AGCCGGCGAT GGGCTTCATC GCCAACCTCA ACTACGTGAT CGTGGCCGTG
ATCGGCGGTC TGCGGGTCGC GTCGGGTACG ATGACGCTCG GCGACGTGCA GGCGTTCATC
CAGTACTCCC GGCAGTTCAC GCAGCCGATC ACGCAGATCG CGGCGATGAT GAACATGCTG
CAGTCCGGGG CGGCGTCGGC GGAGCGCGTC TACGCACTGC TGGACGCGGA GGAGCAGACG
CCGGACCCGG CGGCACCGGA GCGGCTCGAG CGCGTGTCGG GCCGGGTGGC GTTCGAGGAC
GTCTCGTTCT CGTACTCGCC GGACGCGCCG CTCATCGAGG ACCTGTCGCT GGTGGCGGAG
CCCGGGCAGA CGGTGGCGAT CGTCGGCCCG ACCGGCGCCG GGAAGACCAC GCTGGTCAAC
CTCATCATGC GCTTCTACGA CGTGGACGCT GGCCGCATCA CGCTCGACGG CGTCGACACG
CGGGAGATGA CGCGGGACGA CCTGCGGCGC AGCGTCGGGA TGGTGCTCCA GGACACGTGG
CTGTTCGAGG GCACCATCGC GCAGAACATC GTGTACCCGA TCGAGGCGAC GCGGCACGGG
GGAGAGCTCA CGCCGGAGAT CTCCGCGCGC ATGATGCGGG CCGCCGAGGC GACGCACGTC
GACGCGTTCG TGCACAGCCT CCCGGACGGC TTCGACACGG TGGTGACGGA GGAGGGCGGC
AGCCTGTCGG CCGGCGAGCG CCAGCTGCTG ACGATCGCGC GGGCGTTCGT CGCGGACCCG
CCGATCCTCA TCCTCGACGA GGCGACGAGC TCCGTCGACA CCCGTACCGA GGTGCTCGTG
CAGAAGGCGA TGAACGCGCT GCGCGTGGGC CGGACGAGCT TCGTCATCGC GCACCGGCTC
TCCACGATCA CGGGGGCCGA CGTCATCGTG GTCATGGAGC ACGGACGGAT CGTCGAGCAG
GGCTCCCACG CCGAGCTGCT CGAACGGGAC GGGGCGTACC GGCGGCTGTA CCAGAGCCAG
TTCGCCGCGC CCGTGGAGGA GGAGCCGGAC GAGGCGTCCG TGCACTGA
 
Protein sequence
MSDEQRPQQA PNGATSSAAG DDSTPAKTDD AAVTRSARAG GRSGGPWGGM GMPAEKALDM 
RGTLSRLLGD LRDHRVALVG IIVLGVLSVA LAVIGPKLLG NATNIVFAGF LSRNLPDGIT
REQALEGLRA SGNDQLADLL EPLNFVPGAG VDFRALAIIL AWVLVVYLGS FLFGWLQARI
TAIVVQTSMY RLRQRVEAKL GRVPLKYFDG QPRGEVLSRV TNDIDNIAQT MSQTLAQLIT
SVLTVIGVLV MMFVISPLLA LIALVTVPLS ALVTALIAKR SQPQFIRQWR TTGELNGHIE
EMYTGHALVK VFGQQPAAQR TFDDKNGELY DASFKAQFIS GTIQPAMGFI ANLNYVIVAV
IGGLRVASGT MTLGDVQAFI QYSRQFTQPI TQIAAMMNML QSGAASAERV YALLDAEEQT
PDPAAPERLE RVSGRVAFED VSFSYSPDAP LIEDLSLVAE PGQTVAIVGP TGAGKTTLVN
LIMRFYDVDA GRITLDGVDT REMTRDDLRR SVGMVLQDTW LFEGTIAQNI VYPIEATRHG
GELTPEISAR MMRAAEATHV DAFVHSLPDG FDTVVTEEGG SLSAGERQLL TIARAFVADP
PILILDEATS SVDTRTEVLV QKAMNALRVG RTSFVIAHRL STITGADVIV VMEHGRIVEQ
GSHAELLERD GAYRRLYQSQ FAAPVEEEPD EASVH