Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_2311 |
Symbol | |
ID | 7861923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 2594459 |
End bp | 2596546 |
Gene Length | 2088 bp |
Protein Length | 695 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643866404 |
Product | ABC transporter related |
Protein accession | YP_002882324 |
Protein GI | 229820798 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.28541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACG AGCAACGGCC TCAGCAGGCT CCGAACGGCG CGACGTCGTC GGCCGCGGGC GACGACAGCA CCCCGGCGAA GACCGACGAC GCCGCCGTCA CGCGGAGCGC TCGTGCGGGC GGACGCAGCG GCGGGCCCTG GGGCGGCATG GGCATGCCGG CGGAGAAGGC GCTCGACATG CGGGGGACTC TGAGCCGCCT GCTCGGCGAC CTGCGCGACC ACAGAGTGGC GCTCGTGGGG ATCATCGTGC TCGGTGTCCT GTCCGTGGCG CTGGCGGTGA TCGGGCCCAA GCTCCTCGGG AACGCGACCA ACATCGTGTT CGCCGGGTTC CTCTCGCGGA ACCTGCCCGA CGGGATCACG CGCGAGCAGG CGCTCGAAGG GCTGCGGGCG TCGGGGAACG ACCAGCTCGC CGACCTGCTG GAGCCGCTCA ACTTCGTGCC GGGCGCCGGC GTCGACTTCC GGGCGCTCGC GATCATCCTC GCCTGGGTGC TCGTGGTGTA CCTCGGGTCG TTCCTGTTCG GCTGGCTGCA GGCGCGCATC ACGGCGATCG TCGTGCAGAC GTCGATGTAC CGGCTGCGCC AGCGCGTCGA GGCCAAGCTC GGCCGCGTGC CGCTCAAGTA CTTCGACGGC CAGCCGCGCG GCGAGGTGCT GTCGCGGGTC ACCAACGACA TCGACAACAT CGCCCAGACG ATGTCGCAGA CCCTGGCTCA GCTCATCACG TCGGTGCTCA CCGTGATCGG CGTGCTCGTC ATGATGTTCG TGATCTCGCC GCTGCTCGCG CTCATCGCGC TCGTGACCGT GCCGCTCTCG GCCCTCGTGA CGGCGCTCAT CGCGAAGCGC TCGCAGCCGC AGTTCATCCG GCAGTGGCGC ACCACGGGTG AGCTGAACGG ACACATCGAG GAGATGTACA CCGGTCACGC TCTCGTCAAG GTGTTCGGTC AGCAGCCGGC GGCGCAGCGC ACGTTCGACG ACAAGAACGG CGAGCTGTAC GACGCATCGT TCAAGGCCCA GTTCATCTCG GGCACGATCC AGCCGGCGAT GGGCTTCATC GCCAACCTCA ACTACGTGAT CGTGGCCGTG ATCGGCGGTC TGCGGGTCGC GTCGGGTACG ATGACGCTCG GCGACGTGCA GGCGTTCATC CAGTACTCCC GGCAGTTCAC GCAGCCGATC ACGCAGATCG CGGCGATGAT GAACATGCTG CAGTCCGGGG CGGCGTCGGC GGAGCGCGTC TACGCACTGC TGGACGCGGA GGAGCAGACG CCGGACCCGG CGGCACCGGA GCGGCTCGAG CGCGTGTCGG GCCGGGTGGC GTTCGAGGAC GTCTCGTTCT CGTACTCGCC GGACGCGCCG CTCATCGAGG ACCTGTCGCT GGTGGCGGAG CCCGGGCAGA CGGTGGCGAT CGTCGGCCCG ACCGGCGCCG GGAAGACCAC GCTGGTCAAC CTCATCATGC GCTTCTACGA CGTGGACGCT GGCCGCATCA CGCTCGACGG CGTCGACACG CGGGAGATGA CGCGGGACGA CCTGCGGCGC AGCGTCGGGA TGGTGCTCCA GGACACGTGG CTGTTCGAGG GCACCATCGC GCAGAACATC GTGTACCCGA TCGAGGCGAC GCGGCACGGG GGAGAGCTCA CGCCGGAGAT CTCCGCGCGC ATGATGCGGG CCGCCGAGGC GACGCACGTC GACGCGTTCG TGCACAGCCT CCCGGACGGC TTCGACACGG TGGTGACGGA GGAGGGCGGC AGCCTGTCGG CCGGCGAGCG CCAGCTGCTG ACGATCGCGC GGGCGTTCGT CGCGGACCCG CCGATCCTCA TCCTCGACGA GGCGACGAGC TCCGTCGACA CCCGTACCGA GGTGCTCGTG CAGAAGGCGA TGAACGCGCT GCGCGTGGGC CGGACGAGCT TCGTCATCGC GCACCGGCTC TCCACGATCA CGGGGGCCGA CGTCATCGTG GTCATGGAGC ACGGACGGAT CGTCGAGCAG GGCTCCCACG CCGAGCTGCT CGAACGGGAC GGGGCGTACC GGCGGCTGTA CCAGAGCCAG TTCGCCGCGC CCGTGGAGGA GGAGCCGGAC GAGGCGTCCG TGCACTGA
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Protein sequence | MSDEQRPQQA PNGATSSAAG DDSTPAKTDD AAVTRSARAG GRSGGPWGGM GMPAEKALDM RGTLSRLLGD LRDHRVALVG IIVLGVLSVA LAVIGPKLLG NATNIVFAGF LSRNLPDGIT REQALEGLRA SGNDQLADLL EPLNFVPGAG VDFRALAIIL AWVLVVYLGS FLFGWLQARI TAIVVQTSMY RLRQRVEAKL GRVPLKYFDG QPRGEVLSRV TNDIDNIAQT MSQTLAQLIT SVLTVIGVLV MMFVISPLLA LIALVTVPLS ALVTALIAKR SQPQFIRQWR TTGELNGHIE EMYTGHALVK VFGQQPAAQR TFDDKNGELY DASFKAQFIS GTIQPAMGFI ANLNYVIVAV IGGLRVASGT MTLGDVQAFI QYSRQFTQPI TQIAAMMNML QSGAASAERV YALLDAEEQT PDPAAPERLE RVSGRVAFED VSFSYSPDAP LIEDLSLVAE PGQTVAIVGP TGAGKTTLVN LIMRFYDVDA GRITLDGVDT REMTRDDLRR SVGMVLQDTW LFEGTIAQNI VYPIEATRHG GELTPEISAR MMRAAEATHV DAFVHSLPDG FDTVVTEEGG SLSAGERQLL TIARAFVADP PILILDEATS SVDTRTEVLV QKAMNALRVG RTSFVIAHRL STITGADVIV VMEHGRIVEQ GSHAELLERD GAYRRLYQSQ FAAPVEEEPD EASVH
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