Gene Bcav_2257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2257 
Symbol 
ID7861453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2536928 
End bp2538490 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content76% 
IMG OID643866349 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_002882270 
Protein GI229820744 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACGC TCCCCGCCCG GGCCGACGTC GTCATCCTCG GCGGTGGGCA CAACGCCCTC 
GTGGCCGCCG CCTACCTCGC ACGGGAAGGG CTCGACGTCG TCGTCCTCGA ACGGCTCGAC
CACGTCGGCG GCGCCGCGGT CAGCGAGCGG CCGTGGCCGG GACTCGACGC CCGGCTGTCC
CGGTACTCGT ACCTCGTGAG CCTGCTGCCG GACGCGCTCG CCGCCGACCT CGGGCTCCGG
GTGCAGCTCC GCGACCGCGC TACGGCGTCG TACACCCCGT ACCCGGGCGG TGGTCTGCTC
GTCGAGTCGG AGGAGGGCGA GGCCACCCGT GCCTCGTTCC GCGCGCTCAC GGGTGCCGAC
GACGAGTACG CGGCGTGGCG CAGCCTCGCG GACGGGCTGG GCGAGCTCGC CGCGGCCGTC
GCGCCGACCC TGCTCGGGCC GCTGCCCGAC GTCGCCGACG TGCGCGACGC CGTCGACCCC
GGCATCTGGG AGGACGTCGT CCTGCGGCCG ATCGGTGCCG CGATCGAGCG CCGGTTCGCC
CACGACCTCG TGCGCGGCGT GGTCGCGACC GACGCGCTGA TCGGGACGTT CACGTCGCTC
TTCGACCCCT CGCTGCTCGC GAACCGGTGC TTTCTGTACC ACGTCGTCGG GAACGGGACG
GGCCGGTGGC GCGTGCCGGT CGGCGGCATG GGCGCGGTGA CGGCCGAGCT CGAGCGGGTC
GCGCGCGAGG CGGGTGCGCG CCTCGTCACG GGCGCCGACG TGCACGCCGT CGACGCGGGC
GGGGGCGGCG TGGCCGTCGT CCTCGCGGAC GGCCGCGCCA TCGAGGCACC CCACGTGCTG
AGCGGGGTGG CGCCGTCCGT CCTGGCACGG CTGGGCGTGC GGGACGCGAG GGGCGACGTC
CCGCCCGCGC CGCGCGGGGC GCAGGTCAAG ATCAACCTGC TCGTGGACCG CCTCCCGCGA
CTGGCCTCGG GGGCGGACCC GGCGGTCGCG TTCGCGGGGA CGTTCCACGT CGACGAGCAG
CTGTCCCGCC TCGAGGGGGC GTACGCAGCG GCGGCCGCCC GGGAACCGGG TGCGCCCTGG
CCCGTCGGCG AGCTGTACTG CCACACGCTC ACCGACCGGA CCATCCTCGG GCCGCCGCTC
CGGGACTCCG GCGCCCAGAC CCTCACCTAC TTCGGCCTGC ACGCGCCGCC GGAGACGCTC
ACCGACGCCG GGGCGCACGA GCGCGCGTGG CGGGAGGTTG CGAGCGCGCT CCAGGCGCAC
CTCGCGGAGC CGCTCGACGA CCTCCTCGCG AGGGACGCCG ACGGCCGTCC GTGCGTCGAG
GTCGTGCTCC CGTCCGACCT GGAGCGCGAG CTCGGCATGC CGGGCGGGCA CATCTTCCAC
GGCGACCTCG CCTGGCCGTG GCTCGACGAC GGCGAGCGCG CCGGGTCGCC GGCGCAGCGA
TGGGGTGTCG CGACCGGCCA CGAACGGGTC CTCGTGTGCG GGAGCGGCGC GCGACGAGGG
GGAGCGGTGA GCGGGCTCGG TGGTCACCAC GCGGCGCACG CCCTCCTCGA GATGCGTGAG
TGA
 
Protein sequence
MLTLPARADV VILGGGHNAL VAAAYLAREG LDVVVLERLD HVGGAAVSER PWPGLDARLS 
RYSYLVSLLP DALAADLGLR VQLRDRATAS YTPYPGGGLL VESEEGEATR ASFRALTGAD
DEYAAWRSLA DGLGELAAAV APTLLGPLPD VADVRDAVDP GIWEDVVLRP IGAAIERRFA
HDLVRGVVAT DALIGTFTSL FDPSLLANRC FLYHVVGNGT GRWRVPVGGM GAVTAELERV
AREAGARLVT GADVHAVDAG GGGVAVVLAD GRAIEAPHVL SGVAPSVLAR LGVRDARGDV
PPAPRGAQVK INLLVDRLPR LASGADPAVA FAGTFHVDEQ LSRLEGAYAA AAAREPGAPW
PVGELYCHTL TDRTILGPPL RDSGAQTLTY FGLHAPPETL TDAGAHERAW REVASALQAH
LAEPLDDLLA RDADGRPCVE VVLPSDLERE LGMPGGHIFH GDLAWPWLDD GERAGSPAQR
WGVATGHERV LVCGSGARRG GAVSGLGGHH AAHALLEMRE