Gene Bcav_2245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2245 
Symbol 
ID7861441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2525582 
End bp2526325 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content77% 
IMG OID643866337 
ProductHAD-superfamily hydrolase, subfamily IA, variant 3 
Protein accessionYP_002882258 
Protein GI229820732 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.56873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCCCGA ACGCCGCCGA CGCCGAGGCT CGGCCCCTGC CCGCGGCCGT GCTGTGGGAC 
ATGGACGGCA CGCTCGTGGA CACCGAGCCG TACTGGATGT CCGCCGAGTT CGAGCTGGTG
GCGGCGGCGG GCGGCACCTG GACGCACGAG GACGCCGTCG CGATCGTCGG GCAGCCGCTC
GTCGAGTCCG CGGCCGTGCT GCGCAGCAAG GGCGGCGTGG TCGGGACCGA CGAGGAGATC
GTGACGACGC TGCTCGAGCG GGTCGTCGGC CGGGTCCGCG ACGAGGGCGC GCCGTGGCGT
CCCGGCGCCC GCGAGCTGCT CGCCGAGCTG CGGGCCGCCG GCGTGCCCAT GGCCCTGGTG
ACCATGTCCT ACCGAGAGCT CGCCGACGTC GTCCTGGCGG CCCTGCCGGA CGGCACGTTC
GACGCGGTGG TGACGGGCGA CGTCGTCACG CACGGCAAGC CGCACCCCGA GCCGTACCTC
ACGGCCGCGC GCCTGCTGGG CGTCGACGTG GCCGACACCG TGGCCGTCGA GGACTCGGTG
CCCGGCGTCG CGTCGGCGGA GGCGGCCGGC GCCCGGACCA TCGCGGTCCC GATGCAGGTG
GCGGTGCCGG CGGCTCCCGG CCGGAGCCGG CTCGCCACGC TCGACGGCGT CGGCCCGGCG
CTCCTCGCGA GGGTCGCCGC GGGCGAGGTC ATCGACACCG TCGGCCCGGA ACCCCGCGCC
GCCGTCGATC CCGCCCGGCC ATGA
 
Protein sequence
MLPNAADAEA RPLPAAVLWD MDGTLVDTEP YWMSAEFELV AAAGGTWTHE DAVAIVGQPL 
VESAAVLRSK GGVVGTDEEI VTTLLERVVG RVRDEGAPWR PGARELLAEL RAAGVPMALV
TMSYRELADV VLAALPDGTF DAVVTGDVVT HGKPHPEPYL TAARLLGVDV ADTVAVEDSV
PGVASAEAAG ARTIAVPMQV AVPAAPGRSR LATLDGVGPA LLARVAAGEV IDTVGPEPRA
AVDPARP