Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_2200 |
Symbol | |
ID | 7861395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 2475701 |
End bp | 2478433 |
Gene Length | 2733 bp |
Protein Length | 910 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643866292 |
Product | DNA polymerase I |
Protein accession | YP_002882214 |
Protein GI | 229820688 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.759934 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCCTA GGCTGGCACC CGTGACCGAC GACGCGCCAA CCTCCGCGAC CACGAACGCC TCGGTGCCCA GAGGCCGCCT CCTGCTGATC GACGGTCATT CGATGGCGTA CCGGGCGTTC TTCGCGCTGC CCGTGGAGAA CTTCTCGACG ACGTCCGGGC AGCCGACGAA CGCCGTGTAC GGCTTCACGT CGATGCTCAT CAACCTCCTG CGGGACGAGG ACCCGACACA TGTGGCGGTC GCGTGGGACG TCGCGCGCAC CACGTTCCGC ACCGAGGTCT ACGCGGAGTA CAAGGGCACG CGCGACGCGA CGCCCGAGCC GTTCCGGGGC CAGGTGCCGC TCATCCAGGA GGTGCTCACG GCGCTCCGGA TCCCGTCGAT GTCCAAGGAC GACGTCGAGG CCGACGACGT CATCGCCACG CTCGCCGGGC AGGCCGAGCA GGCCGGGCTC GACGTGCTCG TGTGCTCCGG GGACCGGGAC ACGTTCCAGC TCGTGTCCGA CGCCGTCACC GTCCTCTACC CGCGCAAGGG AGTCTCGGAC CTCGTCCGGA TGTCACCGGC CGCGGTGGAG GAGAAGTACG GTCTGGCGCC CGCCCTCTAC CCGGACCTCG CGGCGCTGGT CGGCGAGACG AGCGACAACC TGCCCGGCGT GCCGGGCGTG GGGCCGAAGA CCGCCGCGAA GTGGATCCTC GCGCACGGCG GACTCGACGG CGTCATCGCG GCGGCGGACC AGATCACCGG CAAGGCGGGG GAGAACCTCC GCGCGCACCT CGACCAGGTG ATCCTCAACC GGCGGCTGAA CCGGCTCCTC ACCGACGTCG AGCTGCCGAT CGCCGTCGAC GACCTCGCCC GGTCGGAGAT CGACCGCGAG GCGACGCACG AGGTGTTCGA CGCGCTGCAG TTCCGTGTGC TGCGCGACCG CCTGTTCGAG TACCTCCCCG ACGCGACGGC GCCGACCGAC GTGGCCGAGC TCGCCGCGGA GGTGGAGGTG CTGGCGCCCG GCGGCCTCGA GGCCTGGCTG GCAGGTCGGT CCGGGGCGCT GCTCGGGCTG GAGGTCAGGG GGTCGGTGCA GCAGGGGAGC GGCGACGCGT GGGCGCTGGC GATCGCCGAC GCCGACGGCG CCGCCCTGGG GATCGACCTC GCCGAGATCG ATCCCGCGGA CGAGAAGGTC CTCGCACAGT GGCTCGCGGA CCCGGAGGCG CCGAAGGCCG TGCACGACGC GAAGCCCGCC TGGCACGCGC TCACCGGCCG CGGGCTCGAG GTGCGCGGCG TCGTCATGGA CACAGCGCTC GCGGCCTACC TGTGCCACCC CGACCAGCGT TCGTACGACC TCGCGGATCT CGTGGTGCGG TACCTGCACC GCGAGCTCCC GCGCACGGAT CTGGACGAGA CCGGTCAGGG GATGCTCGAC CTCGACGCGG ACTCCGGGGC GAAGAGCGCC GGAGCGCGGG CCGTCGCCGT CGTCGAGCTC GCCGGACCTC TCGCGGAGGA GGTCGCCGAC CGCGGCGCGC AGGCGCTGCT CGAGGACGTC GAGCTGCCGC TGCTGCGCAC GCTCGCCGAG ATGGAGCACG ACGGGATCGG CGCCGATGTC GAGTACCTGC GGGGCATCGA GCGGGAGTTC GACGCCGTCG TCGAGCGCGC GGCGCTGGGC GCCTACGAGG CGATCGGGCG CCAGGTCAAC CTCGGCTCCC CGAAGCAGCT GCAGGAGGTG CTCTTCGACG ACCTCGGGAT GCCGAAGACC CGGCGCACGA AGACGGGCTA CACCACCGAC GCCGACGCGC TCGCGGACCT GTACGTGAAG ACGGAGCACC CGTTTCTCGA GCACCTCCTC GCCCACCGCG AGGCGATCCG GCTGCGGCAG ACCGTCGAGG GCCTGTTGCG CTCGGTCGCG CCGGACGGAC GCATCCACAC GACGTTCCAG CAGACGATCG CCGCGACCGG GCGCCTGTCC TCCGCCGACC CGAACCTGCA GAACATCCCG ATCCGTACCG AGGAGGGGTA CCGGATCCGG GAGGGCTTCG TCGTCGGCGA GGGCTACGAG ACGCTGCTCA CGGCCGACTA CTCGCAGATC GAGATGCGGA TCATGGCGCA CCTGTCGGGC GACGAGGGCC TCATCGAGGC GTTCCGCTCC GGCGAGGACC TGCACAGCTA CGTCGGGTCA CGCGTGTTCG GGGTGCCGAC CGACGAGGTG ACGTCGGCGA TGCGTTCGAA GATCAAGGCG ATGTCGTACG GACTGGCGTA CGGGCTCTCC GCGTTCGGCC TGTCGAAGCA GCTGAGCATC GACGTGGCCG AGGCGCGCAC CCTGATGGAC GACTACTTCG ACAGGTTCGG CGGCGTCCGC GACTACCTGT CCGGCGTCGT CGCCCAGGCG CGCCAGGTGG GGTACACCGA GACCCTCATG GGCCGGCGCC GGTACCTGCC CGATCTCACG AGCGACAACC GGCAACGCCG CGAGATGGCG GAGCGGATGG CGCTCAACGC GCCGATCCAG GGCAGCGCGG CCGACCTCAT CAAGGTGGCG ATGCTCGGGG TGCACCGGCA GATGGGGGAG GCCGGGATGT CCTCCCGGCT GCTTCTCCAG GTGCACGACG AGCTCGTGCT CGAGGTGGCG CCGGGGGAGC GGGAGGCACT GGAGGAGCTC GTCCGCGCAC AGATGGGGGC GGCCGCCGAG CTCTCGGTCC CGCTCGACGT CTCGGTCGGG ACGGGTCGCA GCTGGCGCGA GGCGGGGCAT TGA
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Protein sequence | MAPRLAPVTD DAPTSATTNA SVPRGRLLLI DGHSMAYRAF FALPVENFST TSGQPTNAVY GFTSMLINLL RDEDPTHVAV AWDVARTTFR TEVYAEYKGT RDATPEPFRG QVPLIQEVLT ALRIPSMSKD DVEADDVIAT LAGQAEQAGL DVLVCSGDRD TFQLVSDAVT VLYPRKGVSD LVRMSPAAVE EKYGLAPALY PDLAALVGET SDNLPGVPGV GPKTAAKWIL AHGGLDGVIA AADQITGKAG ENLRAHLDQV ILNRRLNRLL TDVELPIAVD DLARSEIDRE ATHEVFDALQ FRVLRDRLFE YLPDATAPTD VAELAAEVEV LAPGGLEAWL AGRSGALLGL EVRGSVQQGS GDAWALAIAD ADGAALGIDL AEIDPADEKV LAQWLADPEA PKAVHDAKPA WHALTGRGLE VRGVVMDTAL AAYLCHPDQR SYDLADLVVR YLHRELPRTD LDETGQGMLD LDADSGAKSA GARAVAVVEL AGPLAEEVAD RGAQALLEDV ELPLLRTLAE MEHDGIGADV EYLRGIEREF DAVVERAALG AYEAIGRQVN LGSPKQLQEV LFDDLGMPKT RRTKTGYTTD ADALADLYVK TEHPFLEHLL AHREAIRLRQ TVEGLLRSVA PDGRIHTTFQ QTIAATGRLS SADPNLQNIP IRTEEGYRIR EGFVVGEGYE TLLTADYSQI EMRIMAHLSG DEGLIEAFRS GEDLHSYVGS RVFGVPTDEV TSAMRSKIKA MSYGLAYGLS AFGLSKQLSI DVAEARTLMD DYFDRFGGVR DYLSGVVAQA RQVGYTETLM GRRRYLPDLT SDNRQRREMA ERMALNAPIQ GSAADLIKVA MLGVHRQMGE AGMSSRLLLQ VHDELVLEVA PGEREALEEL VRAQMGAAAE LSVPLDVSVG TGRSWREAGH
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