| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2193 |
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| Symbol | rpsA |
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| ID | 7861388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 2466404 |
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| End bp | 2467870 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643866285 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_002882207 |
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| Protein GI | 229820681 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.210966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCT CTACCCCAGC CCCGGCCACG ACACCGCAGG TCGCCATCAA CGACATCGGG
TCGGCCGAGG ACTTCCTCGC CGCCATCGAC GAGACCATCA AGTACTTCAA CGACGGCGAC
ATCGTCGAGG GCACCATCGT CAAGGTGGAC CGTGACGAGG TTCTCCTCGA CATCGGTTAC
AAGACCGAGG GCGTCATCCT CTCGCGTGAG CTCTCCATCA AGCACGACGT GGACCCCGAG
GAGGTCGTCT CCGTCGGTGA GCGCGTCGAG GCCCTCGTCC TCCAGAAGGA GGACAAGGAA
GGCCGGCTGC TGCTCTCGAA GAAGCGCGCC CAGTACGAGC GCGCCTGGGG CACGATCGAG
AAGATCAAGG AGGAGGACGG CGTCGTCACC GGAACGGTGA TCGAGGTCGT CAAGGGTGGT
CTGATCCTGG ACATCGGGCT CCGCGGCTTC CTCCCGGCGT CGCTCGTCGA GATGCGCCGC
GTGCGCGACC TCCAGCCGTA CGTCGGCAAG GAGCTCGAGG CGAAGATCAT CGAGCTCGAC
AAGAACCGGA ACAACGTCGT GCTCTCGCGC CGCGCCTGGC TCGAGCAGAC GCAGTCCGAG
GTGCGCTCGA CGTTCCTGGC CACGCTGCAG AAGGGCCAGA TCCGCAACGG CGTCGTCTCC
TCGATCGTCA ACTTCGGTGC GTTCGTGGAC CTCGGCGGCG TCGACGGTCT CGTCCACGTG
TCCGAGCTGT CCTGGAAGCA CATCGACCAC CCGTCCGAGG TCGTCGAGGT CGGCCAGGAG
GTCACCGTCG AGGTGCTCGA CGTGGAGCTC GACCGCGAGC GCGTCTCCCT GTCGCTGAAG
GCGACGCAGG AAGACCCGTG GCAGCAGTTC GCCCGGACGC ACGCGATCGG CCAGGTCGTG
CCGGGCAAGG TCACGAAGCT CGTGCCGTTC GGCGCGTTCG TGCGCGTCGA GGACGGCATC
GAGGGCCTCG TGCACATCTC GGAGCTGGCC GTGCGCCACG TCGAGGTGCC GGAGCAGGTC
GCGAAGGTCG GCGAGGAGGT CTTCGTCAAG GTCATCGACA TCGACCTCGA GCGTCGCCGC
ATCTCGCTGT CGCTCAAGCA GGCGAACGAG GGCGTCGACC CGGCCGGTGA CGACTTCGAC
CCGTCGCTGT ACGGCATGGC GGCCGAGTAC GACGAGGCGG GGAACTACAA GTACCCCGAG
GGCTTCGACC CCGAGACGAA CGAGTGGCTC GAGGGCTTCG ACACGCAGCG CGAGGCCTGG
GAGGCGCAGT ACGCCGAGGC GCAGACGCGC TGGGAGGCGC ACAAGCGCCA GGTGGCGGCC
GCCATCGAGG CCGACGCCGA GTCGGGTTCG GCCGACGCGC CGGTCGACGG CCCGAAGAGC
TTCGGCTCCG CACCGGCCGA GGCCGTGGGC ACGCTGGCCT CGGACGAGGC ACTCGCGGCG
CTCCGCGAGA AGCTCACCGG AGCCTGA
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| Protein sequence | MTISTPAPAT TPQVAINDIG SAEDFLAAID ETIKYFNDGD IVEGTIVKVD RDEVLLDIGY
KTEGVILSRE LSIKHDVDPE EVVSVGERVE ALVLQKEDKE GRLLLSKKRA QYERAWGTIE
KIKEEDGVVT GTVIEVVKGG LILDIGLRGF LPASLVEMRR VRDLQPYVGK ELEAKIIELD
KNRNNVVLSR RAWLEQTQSE VRSTFLATLQ KGQIRNGVVS SIVNFGAFVD LGGVDGLVHV
SELSWKHIDH PSEVVEVGQE VTVEVLDVEL DRERVSLSLK ATQEDPWQQF ARTHAIGQVV
PGKVTKLVPF GAFVRVEDGI EGLVHISELA VRHVEVPEQV AKVGEEVFVK VIDIDLERRR
ISLSLKQANE GVDPAGDDFD PSLYGMAAEY DEAGNYKYPE GFDPETNEWL EGFDTQREAW
EAQYAEAQTR WEAHKRQVAA AIEADAESGS ADAPVDGPKS FGSAPAEAVG TLASDEALAA
LREKLTGA
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