Gene Bcav_2122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2122 
Symbol 
ID7859482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2391950 
End bp2393545 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content71% 
IMG OID643866213 
ProductAlkaline phosphatase 
Protein accessionYP_002882136 
Protein GI229820610 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3540] Phosphodiesterase/alkaline phosphatase D 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.7149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGGA CCTCGTTCGC AGCGTTGCCC GAGACCGACC GCCGCAGCTT CCTGGGACTC 
GCCGGCGGTT CCGCGGCGGG GCTGGCCTTC AGCCTCGCCC TCCCCACCGC CGCCGGCGCG
ACGACGCGCG GCGGGAACCT CCCCTTCCCG TTCACGCAGG GCGTCGCCTC CGGTGATCCC
CTGACGGACG CCGTCGTCCT CTGGACGCGC ATCGCGCCCG ACCCGCTGGC ACCGGCGGGC
GGACTCGATC CGGGGGCGCG CGTCGAGGTC GGGTGGCAGG TCGCCGAGGA CGAGCGTTTC
CGCCGGGTCG TGCGCCAGGG CAGCGTGGTG ACGAGCGAGG ACACCTCGCA CACGGTGCAC
GTCGACGTCC GCGGTCTGCG GCCGGGCCGG CCCTACTGGT ACCGCTTCCG CGCCGGCGGC
CACATCAGCG AGGTCGGTCG CACGACGACG GCGCCGAGCC CGCGGTCGAT GCAGCCGCTC
AAGCTGGCCG CCGCGTCCTG CCAGAACTGG CGCGCCGGGT ACTTCCAGGT GATGTCGGAC
GCGATCGCGC AGGGCGCGGA GCTCATGGTG TTCGTCGGGG ACTACCTCTA CGAGTACCCG
GTGCAGCAAC TGCCGATCGG GCGCGCCATC GATCCGACGC TCCCGTCGGA GGTCATTCCC
ACCACTGTGA CCCTCGACCA GTACCGGCTG CGGTACTCCC TCTACAAGAC CGATCCCGAC
CTGCAGGCCG CGCACCGGGT CATGCCGTGG GTCATGTCGT GGGACGACCA CGAGGTGGCC
AACGACTACG AGTCGTGGCC GACGCCGGAC CTCGACCGTC GCGCCGCCGC GTACCGCGCG
TACTGGGAGT TCACGCCGAT CCGCTGGCCC CGGATCCCGC AGGGGGCGGA CGCCCGGCTG
TTCCGGCGGT TCCAGTTCGG ACAGCTCGCG CAGATCGACA TGCTCGACAC GCGTGAGTAC
CGGGACCCCC AGGTGCGCGG GACCGTCGTC GACGACGGGC CGCGGCGCGA CCCGGCACGC
CAGATCCTGG GTGCCGAGCA GGAGGCGTGG TTCGCCGAGG GTTTCGGGGC CGAGCAGGTG
CGCTGGAACA TCGTCGCGCA GCAGATCCTC ATGGCCCGGC TGAACACGGC GAGCGATCCC
GAAGCGCCGG TCGTCTTCTC GGCGGGCACG TGGGACGGCT ACCAGGCGGG GCAGCAGCGC
ATGTTCGACG TCGTCGCCGC CTCGCAGTCG CGCGGCACGT CGCGCAACTT CTTCGTGCTC
TCGGGCGACG TGCACTGCTC GTACGTCTCC GACATCGGCG TCGACACGCT CGATCCGACG
TCTCCGGTCA TCGGCGCCGA GATCACGTCG ACGTCCGTCA CGTCCGCCCA GGACTTCGAC
CCCGAGGCGA ACGAACGCCG CCAGGTCCGC CGGCGCGTGA ACCCCTCGCT CAAGTGGGCC
GACCTGCACT GCGGTTACGT GCTGTGCGAC ATCCGGTCCG ACGTGCTGCG CGCCGACGTC
CGCGTCGTGG ACAAGGTCTC CTCCCACGAG GATCCCGTCT TCACGGGCGC GAGCTTCGAG
GCGTACGACG GCGTGCCCGG CATCGTGCAG GTGTGA
 
Protein sequence
MPRTSFAALP ETDRRSFLGL AGGSAAGLAF SLALPTAAGA TTRGGNLPFP FTQGVASGDP 
LTDAVVLWTR IAPDPLAPAG GLDPGARVEV GWQVAEDERF RRVVRQGSVV TSEDTSHTVH
VDVRGLRPGR PYWYRFRAGG HISEVGRTTT APSPRSMQPL KLAAASCQNW RAGYFQVMSD
AIAQGAELMV FVGDYLYEYP VQQLPIGRAI DPTLPSEVIP TTVTLDQYRL RYSLYKTDPD
LQAAHRVMPW VMSWDDHEVA NDYESWPTPD LDRRAAAYRA YWEFTPIRWP RIPQGADARL
FRRFQFGQLA QIDMLDTREY RDPQVRGTVV DDGPRRDPAR QILGAEQEAW FAEGFGAEQV
RWNIVAQQIL MARLNTASDP EAPVVFSAGT WDGYQAGQQR MFDVVAASQS RGTSRNFFVL
SGDVHCSYVS DIGVDTLDPT SPVIGAEITS TSVTSAQDFD PEANERRQVR RRVNPSLKWA
DLHCGYVLCD IRSDVLRADV RVVDKVSSHE DPVFTGASFE AYDGVPGIVQ V