Gene Bcav_2052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2052 
Symbol 
ID7859332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2333183 
End bp2334205 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content74% 
IMG OID643866146 
ProductNMT1/THI5 like domain protein 
Protein accessionYP_002882069 
Protein GI229820543 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.196348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0508257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCT CCCTCACGTC CCGCCCGCTC CGCTCGGCTC TCGGCGCAGC CGTGGTCGCC 
GTGCCCCTCG TGCTGGCGGC CTGCGGCTCG ACGGCGCCGG GGGAGGAGGG CACGCCGTCG
TCCGCCGCAC CCGACCTCGG CGCCCTGACC ATCGGCCTGA CCTACACCCC GAACGTGCAG
TTCGCGCCGT TCTACGTCGC CGCCGAGAAC GGCTACTACG ACGAGGCCGG GCTCGACGTG
GAGCTGCGCC ACCACGGCCC GTCGGAGTCG CTCTTCGGTG CGCTCGAGGC GGGGGAGGAG
GACCTCGTCG TCGCGGGCGG CGACGAGATC CTCCAGGCGC GGTCCCAGGG GGTCGAGGCC
GTGTCGGTGG CGACGCTGTA CCAGACCTAC CCGGTCGCGC TCCTCGTCGC GGACGACGCC
CCGGTGACCG GACCGGACGA CCTGGCGGGC GCCGTCGTCG GCACCCCCGG GCCGTACGGC
GAGACGTACT TCGGCCTCCT CGCCCTGCTG GACGCGGCCG GGCTCGCGCA GGACGACGTC
CAGGTGGAGT TCATCGGCTA CACGCAGCAG GCGGCCCTCA CCACCGGCGC CGTCGACGGC
GTCATGGGCT ACGTCAACAA CGACGCCGTC CAGCTGGAGC GTTCCGGTGT CGCCATCCGG
ACGATCCCGC TCGGCGACGT CCCGCTGGTC GGCATCGGGC TCGGCGCCCG CGACGACGTC
GTGGCCGAGC GCCCGGACGC CGTGCGCGCG TTCCTCGACG CCACGCTCCG CGGACTGGCC
GACGTCGTCG CGGATCCCGA GGCCGCCGTC GAGCTCTCCG CCGAGCACAT CCCCGGGATG
ACGGCGTCCG CCCAGGAGGA CGCGCTGGCC ACGCTCGAGG CCACGATCCC GCTGTACGGC
GACGCGAGCG GCCGCGCCGA CCTCGAGACG TGGACCGCGA TGGTCGAGTT CATGGCGAGT
CGCGACCTCC TCGAGGGCGA GGTCGACGTG GCGGACGCCG TCACGAACGA CCTGCTGCCC
TGA
 
Protein sequence
MTRSLTSRPL RSALGAAVVA VPLVLAACGS TAPGEEGTPS SAAPDLGALT IGLTYTPNVQ 
FAPFYVAAEN GYYDEAGLDV ELRHHGPSES LFGALEAGEE DLVVAGGDEI LQARSQGVEA
VSVATLYQTY PVALLVADDA PVTGPDDLAG AVVGTPGPYG ETYFGLLALL DAAGLAQDDV
QVEFIGYTQQ AALTTGAVDG VMGYVNNDAV QLERSGVAIR TIPLGDVPLV GIGLGARDDV
VAERPDAVRA FLDATLRGLA DVVADPEAAV ELSAEHIPGM TASAQEDALA TLEATIPLYG
DASGRADLET WTAMVEFMAS RDLLEGEVDV ADAVTNDLLP