| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2047 |
|---|
| Symbol | |
|---|
| ID | 7859327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 2328347 |
|---|
| End bp | 2328982 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643866141 |
|---|
| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
|---|
| Protein accession | YP_002882064 |
|---|
| Protein GI | 229820538 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.044759 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACTTG CGCCTGAGCC CGGGTCCATC GACGCCGTCG TCTTCGACCT CGGCAACGTC
GTCGTCCACT GGGATCCCGT GCCGGCATTC GCCGATCTCG GCTCACCCGC CGAGATCGAG
GAGTTCTTCG CCGAGGTGGA CTTCACCGCG CTCAACCACG CCCGCGATGC GGGGGCGCCG
TGGGCGGAGG CGGCAGCCGA CGTGACGGCG CGGTTCCCGC ACCGCGCCGG CTGGGTGGAG
GCGTACGTCG ACAACTTCCC GCGGACCCTC ACCGGCCTCG TCCCGGGCAC GTCCGACGTG
GTCCGCGAGG TCAAGGCGAC AGGGATCCGC GTCCTCGGGC TGACGAACTG GTCGGCGGAG
ACGTTCCACC ACGCGCCGGC AGCGGCGCCC GTCCTGGCCG AGCTCGAGGG CATCCTGGTC
TCGGGCGAGG TCGGCGTGGC GAAGCCCGAC CCTGCGATCT TCGACGAGCT CGTGCGGCGG
TTCGGGCTCG TGCCGGAGCG CACGGCGTTC ACCGACGACT CCCCGGCGAA CGTGGCCGCC
GCGCGCGCGA GCGGGCTGCA CGGCCTGCTC TTCACGGATG CGGCGACGCT GCGGCGCGAC
CTGCGGGCGG TCGGCGTACC GGTGGCGGCT TCCTAG
|
|---|
| Protein sequence | MTLAPEPGSI DAVVFDLGNV VVHWDPVPAF ADLGSPAEIE EFFAEVDFTA LNHARDAGAP
WAEAAADVTA RFPHRAGWVE AYVDNFPRTL TGLVPGTSDV VREVKATGIR VLGLTNWSAE
TFHHAPAAAP VLAELEGILV SGEVGVAKPD PAIFDELVRR FGLVPERTAF TDDSPANVAA
ARASGLHGLL FTDAATLRRD LRAVGVPVAA S
|
|---|
| |