Gene Bcav_2044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2044 
Symbol 
ID7858664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2323813 
End bp2325078 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content76% 
IMG OID643866138 
Productphosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 
Protein accessionYP_002882061 
Protein GI229820535 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase 
TIGRFAM ID[TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.578758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0035121 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGGCGCGCC AGGGTCGCCG GATCGTGCTC GGCGTCGGGG GCGGCATCGC CGCCTACAAG 
GCTGTCGCCG TCCTGCGCCT CCTCAGCGAG GCCGGGCACG ACGTCCACGT CGTGCCGACC
CCGTCCGCCC TGCGTTTCGT CGGCGCCCCG ACCTGGGAGT CGCTCGCCGG GCACGCCGTC
CACACGGACG TGTTCACCGG AGCCGCCCAG GTCGAGCACG TCGCCCTCGG GCGGTCCGCC
GACCTCGTCG TCGTCGCCCC GGCCACCGCC GACCTGCTCG CCCGCGCAGC GCACGGTCAC
GCGGACGACC TGCTGACGGC GACCCTGCTC ACCGTGACCT GCCCGGTGCT CGTCGCCCCG
GCGATGCACA CCGAGATGTG GCTCCACGCC GCGACGCGGG CCAACGTCGC CACCCTCCGG
GAGCGCGGCG TCGCCGTCCT GGACCCCGAC GACGGGCGCC TCGCCGGCGC CGACTCCGGA
CCGGGCCGAC TGCCCGAGCC GGAAGCGATC GTCGCCGCCG CCCTCGCGCT GCTGACCCCC
ACCGACCTCG CCGGTGTGCG CGCCGTCGTC AGCGCCGGCG GAACCCGCGA GCCCGTCGAC
CCCGTGCGCT TCCTCGGCAA CCGCGGCACC GGGCGCCAGG GCGTCGCCGT GGCGGCCGAG
CTGGCCCGGC GCGGTGCCGA CGTCACGCTC GTCGCCGCGA ACGTCGAGAT CGGCATCCCG
CCCGGCGTCG CCGTCGTGCC GGTCACCACA GCTCTCGAGC TCGAGCAGGC GATGCGCGAC
GCCGCGGGCG ACGCCGACGT CGTCGTCATG TCCGCTGCCG TCGCCGACTT CCGGCCCTCC
ACCACCGCGC CCGCGAAGGT GAAGAAGGCC GACGGTGTCG CGCCCCCGAC GATCGAGCTC
GTCACGAACC CGGACGTGCT GGCGGGGCTG GTCGCCGCGC GCCACCCGGG TCAGGTGATC
GTCGGCTTCG CGGCCGAGAC CGGCGACGAC GCCGGCAGCG TCCTCGACCA CGGCCGGGCC
AAGGCCCGCC GCAAGGGTGC CGACCTGCTG GCCGTGAACG CCGTCGGCAC CGACCAGGGG
TTCGGGGACG TGCCGAACGC CGTCGTCGTC CTCGACGCCG CGGGTGACGA GGTCGGACGC
GCGGGTGGGA GCAAGGCGGA CGTGGCTCGC GGTCTCGTCG ACCTGGTGGC CGCCCGGATC
ACCGGCGTGG ACACCGGCGC GACTGCTCCC ACGGGCGGGG CGGCGAGCGA TACGCTCGCG
CCGTGA
 
Protein sequence
MARQGRRIVL GVGGGIAAYK AVAVLRLLSE AGHDVHVVPT PSALRFVGAP TWESLAGHAV 
HTDVFTGAAQ VEHVALGRSA DLVVVAPATA DLLARAAHGH ADDLLTATLL TVTCPVLVAP
AMHTEMWLHA ATRANVATLR ERGVAVLDPD DGRLAGADSG PGRLPEPEAI VAAALALLTP
TDLAGVRAVV SAGGTREPVD PVRFLGNRGT GRQGVAVAAE LARRGADVTL VAANVEIGIP
PGVAVVPVTT ALELEQAMRD AAGDADVVVM SAAVADFRPS TTAPAKVKKA DGVAPPTIEL
VTNPDVLAGL VAARHPGQVI VGFAAETGDD AGSVLDHGRA KARRKGADLL AVNAVGTDQG
FGDVPNAVVV LDAAGDEVGR AGGSKADVAR GLVDLVAARI TGVDTGATAP TGGAASDTLA
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