Gene Bcav_2035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2035 
SymbolpyrC 
ID7858655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2314389 
End bp2315687 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content75% 
IMG OID643866129 
Productdihydroorotase 
Protein accessionYP_002882052 
Protein GI229820526 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0044] Dihydroorotase and related cyclic amidohydrolases 
TIGRFAM ID[TIGR00857] dihydroorotase, multifunctional complex type 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0194296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTACC TCGTGCGGGG CGCGGCCCCG CTCGGCGGCG AAGCGACCGA CCTCCTGCTG 
GGCGACGGTC GGATCCTCGC GACGGGACCC GACGCGGCCC GTGAGGCGCC GTCCGACGTC
GTCCGGATCG ACGCCGACGG GCTCGTGGCC CTGCCCGGCC TCGTCGACCT CCACACCCAC
CTGCGCGAAC CCGGCCGCGA GGACACGGAG ACCGTGTTCA GCGGCACCCG GGCCGCCGCC
GTCGGCGGGT TCACCGCCGT GCACGCGATG GCGAACACCC AGCCGGTGGC CGACACCGCG
GGCGTCGTCG AGCAGGTGTG GCGGCTCGGG CGCGACGCCG GGTGGGTGGA CGTGCGCCCG
GTCGGCGCTG TCACGGTCGG CCTCGCGGGG GAGCGGCTCG CCGAGCTCGG CGCGATGGCG
CACTCCGCCG CGCGCGTGCG GGTGTTCTCC GACGACGGGA AGTGCGTGGC CGACCCGGTC
CTCATGCGCC GGGCGCTCGA GTACACGAAG GCGTTCGACG GCGTCGTCGC CCAGCACGCG
CAGGAGCCGC GCCTCACCGA GGGCGCACAG ATGCACGAGG GCGTCGTGTC GGCCGAGGTC
GGGCTCACGG GCTGGCCGGC GGTGGCCGAG GAGGCGATCA TCGCGCGCGA CGTCCTGCTG
GCCGAGCACG TGGGTGCCCG CATCCACATC TGCCACCTCT CGACGGCCGG CTCCGTGGAG
ATCGTCCGCT GGGCGAAGTC GCGCGGGATC GACGTCACGG CCGAGGTCAC GCCGCACCAC
CTGCTGCTCA CGGACGAGCT CGCGCGCACG TACGACCCGA GCTTCAAGGT CAACCCGCCG
CTGCGGACGT CGGAGGACGT CGCCGCCGTC CGGGCCGGTC TGGCCGACGG GACGATCGAC
GTCGTCGCGA CCGACCACGC CCCGCACGCC GTCGAGGACA AGGACTGCGA GTGGTCCGCC
GCGGCGTTCG GCATGACGGG CCTGGAGACG GCGCTGTCCG TGGTGCAGGC CACGATGGTC
GACGACGGCC CGTTCGGCTG GGCGGACGTC GCCCGCGTCC TGTCCGTGAC ACCCGCGGTC
ATCGGGCGGG TCGCCGACCA CGGCCGCCCC CTCGCCGTCG GTGAGCCCGC GAACGTCACG
CTCGTCGACC CGTCCGCGCG CACCGTCGTC GACGGTGCCG CGCACCTGAG CGCGAGCCGC
AACACGCCGT TCGCCGGACG CGAGCTGCCG GGAGCCGTGC TCTGGACGTT CCTGCGGGGC
CGCGCCGTCG TGCGCGACGG GAAGCCGGAG GACGCATGA
 
Protein sequence
MTYLVRGAAP LGGEATDLLL GDGRILATGP DAAREAPSDV VRIDADGLVA LPGLVDLHTH 
LREPGREDTE TVFSGTRAAA VGGFTAVHAM ANTQPVADTA GVVEQVWRLG RDAGWVDVRP
VGAVTVGLAG ERLAELGAMA HSAARVRVFS DDGKCVADPV LMRRALEYTK AFDGVVAQHA
QEPRLTEGAQ MHEGVVSAEV GLTGWPAVAE EAIIARDVLL AEHVGARIHI CHLSTAGSVE
IVRWAKSRGI DVTAEVTPHH LLLTDELART YDPSFKVNPP LRTSEDVAAV RAGLADGTID
VVATDHAPHA VEDKDCEWSA AAFGMTGLET ALSVVQATMV DDGPFGWADV ARVLSVTPAV
IGRVADHGRP LAVGEPANVT LVDPSARTVV DGAAHLSASR NTPFAGRELP GAVLWTFLRG
RAVVRDGKPE DA