| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2005 |
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| Symbol | |
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| ID | 7858625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 2284774 |
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| End bp | 2286543 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 643866099 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_002882022 |
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| Protein GI | 229820496 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.343146 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATG TTGCCCTGAC CTCCCCTGCC ACCCAGCCCG TCGGCGCCGG CTCCGAGCCG
TCGTTCGACG ACCTGGGCCT GCCGCAGGCC CTCCTCGACG CCGTCACCGG CCTCGGCTTC
ACGACCCCCA CCCCCATCCA GACGGCGGCG ATCCCGGCGC TGCTCTCCGG CCGGGACCTC
GTCGGCGTCG CCCAGACGGG CACCGGCAAG ACCGCCGCGT TCGGTCTGCC GCTCCTCGCC
GCCGTCGACC CGCAGCTGGC CGCCGTGCAG GCCCTCGTGC TCACGCCGAC GCGCGAGCTC
GCGATCCAGG TGAGCGACGC GGTGGCGTCG TTCGTGCCGT CCGGTGCCGG CGTGAAGGTG
CTGCCGATCT ACGGCGGCGC GAGCTTCGTG CCGCAGCTGC GCGGCCTCGA GCGGGGAGCG
CAGGTCGTCG TCGGGACTCC CGGTCGCGTG ATCGACCTCC TCGAGCGGGG TTCGCTCGAC
CTCGACGCGC TGCGCTACCT CGTGCTCGAC GAGGCCGACG AGATGCTCCG GATGGGCTTC
GCCGAGGACG TCGACGTCAT CCTGGCGAAG ACGCCCGCCA CGAAGCAGGT CGCGCTGTTC
TCCGCGACCA TGCCGCCGCC GATCCGCAAG GTCGCCGAGA CGCACCTGCG CAACCCGGAG
GAGATCGCCG TCGCCCGCCA GGCCACGCCG ATCGCCGCGG TGACGCAGAC GTACGCCATC
GTGCCGTACC GGAACAAGGC CGAGGCGCTG TCGCGGGTCC TCGCGACGAG CGACGCCGAC
GCCGCGATCG TGTTCGTCCG TACGCGTGAG ACCGCGGAGG AGGTCGGCAC CGCCCTCGCG
TCGCGCGGGA TCAACGCCGC GTCGATCAGC GGCGACGTCG CTCAGCGTGA ACGTGAGCGG
ATCGTCGAGC GGCTCCGCTC GGGTGCGCTC GACGTGCTCG TGGCGACCGA CGTCGCGGCC
CGTGGTCTCG ACGTCGAGCG CATCGGGCTC GTCGTCAACT TCGACGTGCC GCGCGAGGTC
GAGACGTACG TGCACCGGAT CGGGCGGACC GGCCGCGCTG GGCGTACCGG GAACGCCCTG
ACGTTCCTCA CGCCGAAGGA GAAGCCGCGC CTGCGCACGA TCGAGCGCGT CACGGGTTCC
CGCCTCGTCG AGGCCACCAT CCCGACGAAC GCCGAGGTCG CCGCGCACCG GACCGGTGCG
GCGCTGGCGA CGGCGCACGC GCGCCTCGGG GCGGGCGACG TGTCCGCGCA CCGGGAGCGT
CTCGTCGCCC ACGTCGCGGA GCTCGGCGTG GACCCGCTCG ACGTCGCTGC TGCGCTCCTC
GCGCTCGCTG TCGGCGACGA CGGCGCTCCC GCCGGCGATG ACCTCGCCCT TCCCGCGCAC
GACGGCGACC GGCAGCGCGG GTTCGACGGT GACCGGGGTC GCGAGCGCGG CGGACGACGT
GGGGGCGGAG ACGGCGAGAA GTACCGGATC GCCGTCGGCC ACCGGGACGG CGTCAGCCCG
CAGGCGATCG TCGGCGCGAT CACCGGTGAG GGCGGCCTCC GCGGCGCCGA CATCGGCAAG
ATCGACATCT TCCCGAGCTT CTCCCTCGTG GAGATCCCGG GCGGGGTCTC CCCCGACGTG
GCGCGCCGGA TCGGTGCCGC CAAGGTCGCG GGGCGCCCGC TGCGGATCCG GCTCGACGAC
GGCCCGCCGA ACCGCGGCCA CCGCTCGGGC GGCGGCCAGC GTGACGCGCG GGGTCCGCGC
GACTCGCGCC GGCCCTCGCG CGCGTACTGA
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| Protein sequence | MSDVALTSPA TQPVGAGSEP SFDDLGLPQA LLDAVTGLGF TTPTPIQTAA IPALLSGRDL
VGVAQTGTGK TAAFGLPLLA AVDPQLAAVQ ALVLTPTREL AIQVSDAVAS FVPSGAGVKV
LPIYGGASFV PQLRGLERGA QVVVGTPGRV IDLLERGSLD LDALRYLVLD EADEMLRMGF
AEDVDVILAK TPATKQVALF SATMPPPIRK VAETHLRNPE EIAVARQATP IAAVTQTYAI
VPYRNKAEAL SRVLATSDAD AAIVFVRTRE TAEEVGTALA SRGINAASIS GDVAQRERER
IVERLRSGAL DVLVATDVAA RGLDVERIGL VVNFDVPREV ETYVHRIGRT GRAGRTGNAL
TFLTPKEKPR LRTIERVTGS RLVEATIPTN AEVAAHRTGA ALATAHARLG AGDVSAHRER
LVAHVAELGV DPLDVAAALL ALAVGDDGAP AGDDLALPAH DGDRQRGFDG DRGRERGGRR
GGGDGEKYRI AVGHRDGVSP QAIVGAITGE GGLRGADIGK IDIFPSFSLV EIPGGVSPDV
ARRIGAAKVA GRPLRIRLDD GPPNRGHRSG GGQRDARGPR DSRRPSRAY
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