| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1965 |
|---|
| Symbol | |
|---|
| ID | 7858358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 2240819 |
|---|
| End bp | 2241415 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643866055 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002881982 |
|---|
| Protein GI | 229820456 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.116424 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0000364036 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGATCGGAC AGGGCAGTTC GGGCAGCTCG GGGAGTCCGG CCCTGCCGCC CGACTTCGAG
GCCGCGCTGC TGAGCCTGCG CGGGCACCGC CTGCGCCCGG AGATCCACCT CGAAGAGGTG
CCGCCACCGA CCCGCATCGC GCCGTGGGCG CTCGCCCTGA CCGGCGAGGT GAACACGACC
CGTGACCCGG ACACGCTGCT CGCGAACGGA CGGTTCGTCG TCCTCCACGA CCCGGAGGGT
CAGGAGGCGT GGCGCGGCAC GTTCCGGGTG GTCGTGCTCG CCCGGGCGAA GCTGGAGGAC
GACGTCGGGG CCGATCCGCT GCTCGGCGAG GTCGGCTGGA GCTGGCTCAC CGACTCGTTG
CGCGACTTCG ACGTCGGGTA CCACTCGCTC TCCGGCACGG TGACCCGCGT GCTCTCGGAG
AGCTTCGGCG GGCTCGAGCT GCGCGAGCAG GAGGTCGAGA TCGAGCTCCG GGCCTCGTGG
ACGCCGTCGT CCACCGACCT GGGACCGCAC CTGCGGGCGT GGGCCGCGAC GACGGCGTGG
GCCGGAGGGC TCCCGCCCCT GCCGGAGAAC GTGACGAGCC TGGCCCCGCG GCGTTGA
|
|---|
| Protein sequence | MIGQGSSGSS GSPALPPDFE AALLSLRGHR LRPEIHLEEV PPPTRIAPWA LALTGEVNTT
RDPDTLLANG RFVVLHDPEG QEAWRGTFRV VVLARAKLED DVGADPLLGE VGWSWLTDSL
RDFDVGYHSL SGTVTRVLSE SFGGLELREQ EVEIELRASW TPSSTDLGPH LRAWAATTAW
AGGLPPLPEN VTSLAPRR
|
|---|
| |