| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1960 |
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| Symbol | |
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| ID | 7858353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 2234728 |
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| End bp | 2236851 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643866050 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_002881977 |
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| Protein GI | 229820451 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.502183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000170947 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCACGA CCACCACCAC CGACCGCGCC GAGCGTGTCA CGCACTCCCT GGTCCGCGAC
GTCGCCCTGC CCGGCGGCGC CGGGACGCTC GCGCTCGTCA CGCTGGACAA CGGCTTCGAC
CACACCAAGC CCAACACGCT CGGTCCCGAC GGCATCCGCG AACTGCACGC AGCGCTCGAG
GCCCTCCAGG CCCGTGCGCG TGCCGGCGAG ATCGCGGCCG TCGGCGTCAC CGGAAAGCCG
TACGTGCTCG CCGCCGGAGC GGACCTCACG CAGGCCTCCG CCGTCGCGAC CCGCGACGCC
GCCCTGCAGC TCGGTCGGTC CGGGCACGCC GCGTACCGCC TGCTCGGCGA GATGGGCGTC
CCGACGTTCG CGTTCGTCAA CGGCGTCGCG CTGGGCGGCG GTCTCGAGGT GGCGCTGAAC
TGCGACTACC GGACGGCGGC AGGATCCGTG CGGGCGCTCG GGCTTCCTGA GGTCGGCATC
GGTCTGATCC CGGGTTGGGG CGGGGCCTAC CTCGTGCCGC GTCTGGTGGG CATCGAGCAG
GCGATCGACG TCGTGCTGAC CCGCCCGAGC GCGAACAAGC CGTACTCCGC AGCCGAGGCC
GGAAAGCTCG GCCTCGTGGA CGTCGTGCTC GACGACGCCG ACTTCCTCGC CGAGTCGATC
CGGTGGGCGG CACGGGTGCT GGGCGGCGAC GTCGTCGTGC CGCGCCGAGA CCTCGACCCG
CCCGAGGTGT GGGACGCCGT CGTCCACGCC ACTCGCCAGC GGCTCGACGC CGTCGTCCGC
GGCTCGCGGC CCGCCCCGTA CCGCGCCCTC GACCTCCTCG CCGCCGCACG CACGGCGACG
AAGGACGAGG CGTTCGCCGC GGAGGACGAG GCCCTCGCCG ACCTCATCAT GAGCGACGAG
ATGCGGGCGA GCGTGTACGC GTTCCAGCTC GTGAGCCGGG CCAAGCGTCC GGCCGGCGCG
CCCGACCCGG CACTGGCGCG GAAGGTGACT CGAGTCGGGA TCATCGGGGC GGGCCTCATG
GCGGCCCAGA TCGCCCAGCT CGTGGCCCAG CGCCTCAAGG TGCCCGTGGT GATGCGGGAC
CTCGACGACG AGCGGGTCGC CGCCGGGCTC GGGCACGTCC GTGCGAGCGT CGAGAAGCTC
GCCGGGTCCG GGCGGATGCC GGCCGACGCC GCCGCGCGCC TCGTGGGGTC GATCACGGGC
ACGACCGACC TGGCCGACCT GGCCGGCTGC GACCTCGTGA TCGAGGCGGT GACGGAGCGG
CTCGACCTCA AGAAGCGGGT CTTCGCGGAG ATCGAGCCGG TCGTCGGACC CGACGCGATC
CTCGCCACGA ACACGTCGGC GCTCTCCGTC ACGGCGATGG CCGCCGATCT CGCCCACCCC
GAGCGCGTCG TCGGCCTGCA CTTCTTCAAC CCGGTGCACG CGATGCCGCT GGTCGAGGTC
GTCCGTGCCG AGCGCACCTC CGACGAGGCG CTGGCCACGG CGTTCGCCGT CTGCGCAGGG
CTGCGGAAGA CCGCCGTCGG CGTCGCCGAC CGACCCGGCT TCGTCGTCAA CCGCCTGCTC
GTCCTCCTCC TGGGGAAGGT CGTGGAGGCG GTCGAGAACG GGACGCCGGT CGAGGTGGCG
GACCGCTCGC TCGACCCGCT CGGCCTCCCG ATGCCGCCGT TCGAGCTGTT CGACCTCGTC
GGGCCCGCCG TCGGCCTGCA CGTGCTGACG TCGCTGCGCG AGGACCTCGG CGAGCGGTTC
CCGGCTTCCG CCGGGCTCGA GCGGATCGTC GCCGACGGCG TCCCGGTGGT CGGCGCCGCG
CCGGCGAAGG GGCTGCCGAA GCCGGTGGAC CCGGCGCTGC AGGCGGTGTT CGACGCCGTC
CGCCCGGCGG GAGCGACGGC GTCACCGCGC GACGCGGCGG GCGTGCTGGA CGACGTCCTC
CAGGCCCTGA CGACGGAGGT CGGCCTCATG CTCGACGAGG GCGTGGTGGG ATCGCCCGAC
CAGATCGACC TGTGCATGAT CCTCGGCGCC GGGTGGCCGT TCCACCTCGG CGGCATCACG
CCGTACCTGG ACCGCGCCGG CTACTCCGAG CGGGTGCTGG GGCGGCGTCT CCTGCCCGAC
GGCGTGGCGA ACGCTCCGCG CTGA
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| Protein sequence | MSTTTTTDRA ERVTHSLVRD VALPGGAGTL ALVTLDNGFD HTKPNTLGPD GIRELHAALE
ALQARARAGE IAAVGVTGKP YVLAAGADLT QASAVATRDA ALQLGRSGHA AYRLLGEMGV
PTFAFVNGVA LGGGLEVALN CDYRTAAGSV RALGLPEVGI GLIPGWGGAY LVPRLVGIEQ
AIDVVLTRPS ANKPYSAAEA GKLGLVDVVL DDADFLAESI RWAARVLGGD VVVPRRDLDP
PEVWDAVVHA TRQRLDAVVR GSRPAPYRAL DLLAAARTAT KDEAFAAEDE ALADLIMSDE
MRASVYAFQL VSRAKRPAGA PDPALARKVT RVGIIGAGLM AAQIAQLVAQ RLKVPVVMRD
LDDERVAAGL GHVRASVEKL AGSGRMPADA AARLVGSITG TTDLADLAGC DLVIEAVTER
LDLKKRVFAE IEPVVGPDAI LATNTSALSV TAMAADLAHP ERVVGLHFFN PVHAMPLVEV
VRAERTSDEA LATAFAVCAG LRKTAVGVAD RPGFVVNRLL VLLLGKVVEA VENGTPVEVA
DRSLDPLGLP MPPFELFDLV GPAVGLHVLT SLREDLGERF PASAGLERIV ADGVPVVGAA
PAKGLPKPVD PALQAVFDAV RPAGATASPR DAAGVLDDVL QALTTEVGLM LDEGVVGSPD
QIDLCMILGA GWPFHLGGIT PYLDRAGYSE RVLGRRLLPD GVANAPR
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