Gene Bcav_1899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1899 
Symbol 
ID7858292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2162412 
End bp2163728 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content73% 
IMG OID643865990 
ProductFAD-linked oxidoreductase 
Protein accessionYP_002881917 
Protein GI229820391 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID[TIGR01679] FAD-linked oxidoreductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0587039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000156043 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGAGACGAC GCTGGAGCAA CTGGGGCCGC TCCGCGCAGG CGGAGTTCGC CGCCGTCGCC 
CGCCCACGCG ACGAGGACGC GCTGGCGGCG ACGATCAGGT CGGCCGCCCG CGCCGGGCAG
CGGGTCCGGG CGCTCGGTGC TGGGCACTCC TTCACCCCGG CCGCGGTGAC GGACGGCGTC
AGCGTGCGTC TGGACCACGT CACCGGACTG TGGGCCGTGG ACGAGGACGC CGGGCTCGTC
ACCGTGGGCG CCGGCACGCG GCTGCGCGAC CTGCCGGGCC TCCTGCGGCC GTACGGCCTC
GCGATGGAGA ATCTCGGCGA CATCGACGTC CAGACGATCG CCGGGGCGAT CTCGACCGGC
ACGCACGGCA CGGGCTCGGC GTTCACCGGG ATCGCCGGCC AGGTGCGCGG GCTGCGGATC
GCCCTCGCCG ACGGCACCCT CGTCGACTGC TCGCCGCAGC TGCGGCGCGA CCTGTTCGAG
GCTGCCCGGC TCGGCCTGGG GGCGTTCGGT GTGCTCGTGT CTGTGACGCT GCAGTGCGTG
CCGGCGTTCC AGCTCGCCGC CCACGAGCAT GCGGTGCCGC TGGACGGGGT CCTCGAGGGG
TACGCGGAGC TGGTGCGTTC CGAGGACCAC CTCGACCTGT ACTGGTTCCC GCACACGCGC
ACGGCGCTCG TGAAGGCGAA CCGTCGCGAG GCCTCTCCGG GCGCGGCGCA GCCGCTCGGT
GCGTGGCGCG CCTGGTGGGA GGACGAGTTC GTGTCGAACG GGCTGCTCGC GCTGGTCTCC
GAGATCGGCG CCGCAGCCCC GTCCGCGGTT CCGGTGCTCA ACCGGATCGC CGCAGCCACG
GTCGCGGAAC GTCGGTACAC GGGCGACTCC CACGCCGTCT TCACGGCACC GCGGCGCGTG
CGCTTCCGCG AGATGGAGTA CGCGATCCCG CTGGCCGCGC TTCCGGACGC GGTGCGCGAG
ATCAGACGCA CCATCGACGC TCGCGGATGG CGCATCTCGT GGCCTCTCGA GATCCGGACC
GCTGCCGCCG ACGACGTGTG GCTCTCCACC GCCTACGAAC GCGACAGTGC GTACGTGGCC
GTGCACCGGT ACGTCCGGGA CCCGTTCGTG GCGTACTTCC GGGAGGTCGA GGAGGTCCTC
CTCGCGTTCG GGGGCCGGCC GCACTGGGGC AAGCTGCACA CCCAGTCGGT CGGCGAGCTG
TCCGCCCGGT ACCCGAGGCT CGACGACGCG CGACGGGTGC GTCGCGAGGT CGATCCTGCC
GGGACGTTCG CGAACCGGTA CGTCGACCGG GTCCTCGGGA GCGTCACCTC GGCCTGA
 
Protein sequence
MRRRWSNWGR SAQAEFAAVA RPRDEDALAA TIRSAARAGQ RVRALGAGHS FTPAAVTDGV 
SVRLDHVTGL WAVDEDAGLV TVGAGTRLRD LPGLLRPYGL AMENLGDIDV QTIAGAISTG
THGTGSAFTG IAGQVRGLRI ALADGTLVDC SPQLRRDLFE AARLGLGAFG VLVSVTLQCV
PAFQLAAHEH AVPLDGVLEG YAELVRSEDH LDLYWFPHTR TALVKANRRE ASPGAAQPLG
AWRAWWEDEF VSNGLLALVS EIGAAAPSAV PVLNRIAAAT VAERRYTGDS HAVFTAPRRV
RFREMEYAIP LAALPDAVRE IRRTIDARGW RISWPLEIRT AAADDVWLST AYERDSAYVA
VHRYVRDPFV AYFREVEEVL LAFGGRPHWG KLHTQSVGEL SARYPRLDDA RRVRREVDPA
GTFANRYVDR VLGSVTSA