Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1898 |
Symbol | |
ID | 7858291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 2161192 |
End bp | 2162415 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 643865989 |
Product | alanine racemase domain protein |
Protein accession | YP_002881916 |
Protein GI | 229820390 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.107111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000153427 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGCCGCC GCGATGCCGG CGTGCCCCGG GAGGTCCGAG CCGCCGTCGC GCACCTGGAC CCCCCGTTCG GCGTCGTCGA CCTCGGCGCG TTCCGCGCCA ACGCCGGCGA CCTCGTCCGC CGGGCGCGCG GCGTCCCGAT TCGCGTCGCG ACGAAGTCCG TGCGGATCCG GGAGCTGCTC GCCGCGACGC TCGAACGGCC CGGCTTCGCC GGCGTGCTCG CGTACACGCT CCCGGAGGCC CTGTGGCTCG TCGAGCAGGG GTTCGACGAC GTCGTCGTCG GGTATCCCAC GGCACATCGC GCGGCGCTCG GTGCGCTCGC CGCCGACGAG CGCGCCGCCC GGAGCGTCAC GCTCATGGTC GACGACGTCG CCCAGCTCGA CCTCGTCGAC GCCGTGACGC CGCCCGGCCG GCGGCCGGAG ATCCGCATCT GCCTCGAGCT CGACGCGGCG TTCCGGACCG CCGGGGGAGC GGTGCGGTTC GGCGCCTGGA GGTCGCCCGT GGGCACGCCG GACGCGGCGG TCCGGCTGGC GCGCGCCGTC GTGGCGCGCC CCGGCTTCGC GCTCGTCGGG CTGATGGCGT ACGAGGGGCA GATCGCCGGG GTCGGCGACG CCGGGCGCGG GCCTCGGGCG ATCGCCGTGC GGGCGATGCA GCGTGCCTCG GCGGCCGAGC TCGCCGAGCG GCGCGCGGCG GTCGTCGCGG CGGTGCGCAG GGTGGCCGAC CTCGAGTTCG TGAACGGCGG CGGCACCGGC TCGCTCGAGA CGACGACGTC CGAGGCCGCG GTCACGGAGG TCACCGCGGG ATCCGGGCTG CTCGGGTCCG GCCTGTTCGA CACGTACCGC GCGTTCCGTC CGCGGCCCGC CTCCTGGTTC GTACTGCCGG TGGTGCGTCG CCCGACCCGC GGCGTGGTCA CCGTGCTCGG CGGCGGGTGG GTCGCGTCCG GGCCGCCGGG TCACGACCGC CTCCCCTCGG TCGCGCACCC GCCCGGCCTC GCGTACGTGG CCCGCGAGGC GGCGGGCGAG GTCCAGACCC CGCTGCGCGG CCGTGCGGCG CGGCGCCTCG CCGTCGGCGA CCACGTCTGG TTCCGGCACG CGAAGGCCGG CGAGGGAGCT GAGCACCTCG GCGCGGTGGT GGCGGTGGAC TCCGCCTCGC GGACCGCCGA CGGCGCGGCG GCCGTCGTCG GCGAGCTGGC CACCTACCGC GGTGAGGGGC AGGCGTTCCT GTGA
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Protein sequence | MSRRDAGVPR EVRAAVAHLD PPFGVVDLGA FRANAGDLVR RARGVPIRVA TKSVRIRELL AATLERPGFA GVLAYTLPEA LWLVEQGFDD VVVGYPTAHR AALGALAADE RAARSVTLMV DDVAQLDLVD AVTPPGRRPE IRICLELDAA FRTAGGAVRF GAWRSPVGTP DAAVRLARAV VARPGFALVG LMAYEGQIAG VGDAGRGPRA IAVRAMQRAS AAELAERRAA VVAAVRRVAD LEFVNGGGTG SLETTTSEAA VTEVTAGSGL LGSGLFDTYR AFRPRPASWF VLPVVRRPTR GVVTVLGGGW VASGPPGHDR LPSVAHPPGL AYVAREAAGE VQTPLRGRAA RRLAVGDHVW FRHAKAGEGA EHLGAVVAVD SASRTADGAA AVVGELATYR GEGQAFL
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