Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1873 |
Symbol | |
ID | 7860495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 2137852 |
End bp | 2138715 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643865964 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002881891 |
Protein GI | 229820365 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.168129 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.121755 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGAGCC CCGCCCGTTC GGACCGTGGG TTCGACACCG TGGTCAACGT CCTCCTCGGG CTCGTCATCG TGGCGGCGGT GCTCCCGCTC CTCGTGGTGG TGTCCGCGTC GTTCACCCCG TACTCCGAGA TCCTGAGCAA CGGCGGCTAC ACGCTCCCGA CAGAGTTCAC GCTGGACGGG TACCGCATGG TCCTCGCGGA CTCGCGTCTG CAGCAGGGCT TCGTCGTGAC GACGTTCGTC ACGGTGGTGG GCACGGCGCT CAACCTCGTC GTGTCGGTCC TCTTCGCCTA CCCGTTGAGC CAGCACCGCC TCCCGGGGCG GCGCGGCATC CTGTTCGTCG CGCTCCTCAC GACGCTGTTC TCGGCCGGGA TCATCCCCAC GTATCTCGTC GTCAAGGCGA CCGGGCTGCT CGACACCGTC TGGGCGATGA TCATCCCGAC GACGATCAGC GTGTTCAACG TCTTCATCCT CAAGACGTTC TTCGAGGGGA TCCCCGGTGA GCTGTTCGAG GCCGCCCGGA TCGACGGCGC GGGAGAGCTC CGGCTGCTGC TGCGCATCGT GGTACCGCTC GCGGTGCCGG TGCTCATGAC GATCGGCTTG TTCTACGCCG TCGGGCACTG GAACACGTTC ATGGCCGCGG TGCTCTACAT CCGTGACGCC GACCTGCAAC CTCTGCAGGT CGTGCTGCGG AACCTCCTCA CGGAGGTCTC CTCCGACGCG GCGGCGGATC CAGACGCCGT CGTCCCCACC GTCACGTTCC GGATGAGTGC CGTGGTGCTC ACCGCCCTGC CGATGATCCT GCTCTACCCG TTCATCCAGA AGCACTTCCG GCACGGCGTC ATGCTGGGCT CCGTCAAGGG GTGA
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Protein sequence | MVSPARSDRG FDTVVNVLLG LVIVAAVLPL LVVVSASFTP YSEILSNGGY TLPTEFTLDG YRMVLADSRL QQGFVVTTFV TVVGTALNLV VSVLFAYPLS QHRLPGRRGI LFVALLTTLF SAGIIPTYLV VKATGLLDTV WAMIIPTTIS VFNVFILKTF FEGIPGELFE AARIDGAGEL RLLLRIVVPL AVPVLMTIGL FYAVGHWNTF MAAVLYIRDA DLQPLQVVLR NLLTEVSSDA AADPDAVVPT VTFRMSAVVL TALPMILLYP FIQKHFRHGV MLGSVKG
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