Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1797 |
Symbol | |
ID | 7861307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 2059691 |
End bp | 2061346 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643865887 |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_002881815 |
Protein GI | 229820289 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.645119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0256709 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTCTCCT CGCGCTCCCG CGTCGCCCGT CACGCCACGA TCCTCCTCTC GGCCCTCCTG CTCGCCGCCT GCGCAGGCGG CGACCCCGGG GGTGGCGAGC AGTCCGGGAC GGAAGCCGAA CCCGAGCCCG GGGGACGCCT CACCGTCGCG CTCAACGGCG ACGAGCCGGA CAACCTCGAC CCGCACGGAC TTTCGGCCAC CAACACCACC GTCCTGCTGC GCCCGGTCCT CGAGTCGCTG TTCTGGCAGG CCGAGGACGG GACGTTCCAC CCCTGGCTCG CCGACTCGTG GGAGGTCTCT GACGACGGTC TCGTCTACAC GTTCGCCCTC CGGGAGGGCG TGACCTTCCA CGACGGCGCC GCCTGGGACG CGGAGGCACT GCTCGCGAAC TTCGAGCACA TCCTCGACCC GGAGACGCAG TCGCCGCTCG CCGCCGCGTA CATCGCTCCT TACTCCAGCG CCCGCGTCGT GGACGAGCTC ACCCTGGAGG TGACGCTCTC GACCCCGTAC TCCGCGTTCA TCAACGTGCT GTCGCAGAGC TACCTGTCGA TCGTGTCGCC GCAGCAGATC GCCGAGGACC CCGCCGGCAT CCGGGAGCAC CCGGTGGGCA CCGGCCCGTT CATCTTCGAC CACTGGACGC AGGGCGAGAG CATCTCCTAC CGCCAGAACC CGGACTACGA CTGGGCGCCG GAGGCTGCGG CGCAGCACGA GGGACCCGCC TACGTCGACG AGCTCGAGAT CCTCTTCATC CCGGAGGAGG GCGTGCGGTA CAACGCGCTC GCCGCCGGGG ACGTCGACGT CATCGACTGG ACGCCGCCGC AGAACGTCGA GGCGGTCGAG GCCAGCGCGG ACCTGGACTT CGCCCGGGTC GACAGGCCGG GCCACCCGTT CTCGATCTGG TTCAACACCT CGCGTGCGCC GCTCGACGAC GTCCGGGTGC GACAGGCCGT GGTGGCCGCC GTCGACCGGC AGTCGATCGT CGACACCGTC TCCTTCGGCC AGTGGCAGCT CGCCGACGGG TACCTCACGT CGCCGACGCC GGACTTCGCG CCGAACTCCG ACGCGTCGAT CACCTACGAC GTCGAGCGGG CGAACGAGCT GCTCGACGAG GCGGGCTGGA CCGAACGCGA CGCCGAGGGG TACCGCACGC GCGACGGCGA GCGGCTCTCC CTGTTCTACC CCACGGCCGG CACGATCGCG CAGACGCAGC AGATCCTCGA GCTGGCCCAG GCCCACCTCA AGGAGGTCGG TGTGGAGGTG GTGATCCAGA CCGTGTCCGA GCAGGAGCAG TCGGAACGCT CCAGCGCCGG TGACTTCGAC CTCAGCGCCG GGATCTGGAC GACGAACACC GCCGACGTCC TGTACATCCA GTACAACTCC CACAACATCA CCACGCCCGA GCGCCGCGGC AACAACTCGA CGCGTCTGCG CGACGAGCAG ATCGACGACC TCACGCAGCG CGCCCGCGAA GCAACGGACG ACGCCACCCG TCAGGAGCTC TACTCCGAGG CGCAGGCTCG GCTGGTCGAG CTGGCGCCGT CGCTGCCGCT CTACACCCGC CCGAGCCTCG TGTCCTCCTC GTCGTCGGTC CACGGCATCG GCTTCGACTA CGCCTACGGG GCGCTGTGGT TCTACGACAC ATGGAAGGAG TCCTGA
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Protein sequence | MVSSRSRVAR HATILLSALL LAACAGGDPG GGEQSGTEAE PEPGGRLTVA LNGDEPDNLD PHGLSATNTT VLLRPVLESL FWQAEDGTFH PWLADSWEVS DDGLVYTFAL REGVTFHDGA AWDAEALLAN FEHILDPETQ SPLAAAYIAP YSSARVVDEL TLEVTLSTPY SAFINVLSQS YLSIVSPQQI AEDPAGIREH PVGTGPFIFD HWTQGESISY RQNPDYDWAP EAAAQHEGPA YVDELEILFI PEEGVRYNAL AAGDVDVIDW TPPQNVEAVE ASADLDFARV DRPGHPFSIW FNTSRAPLDD VRVRQAVVAA VDRQSIVDTV SFGQWQLADG YLTSPTPDFA PNSDASITYD VERANELLDE AGWTERDAEG YRTRDGERLS LFYPTAGTIA QTQQILELAQ AHLKEVGVEV VIQTVSEQEQ SERSSAGDFD LSAGIWTTNT ADVLYIQYNS HNITTPERRG NNSTRLRDEQ IDDLTQRARE ATDDATRQEL YSEAQARLVE LAPSLPLYTR PSLVSSSSSV HGIGFDYAYG ALWFYDTWKE S
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