Gene Bcav_1722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1722 
Symbol 
ID7859664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1970708 
End bp1972090 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content72% 
IMG OID643865810 
Productprotein of unknown function DUF21 
Protein accessionYP_002881740 
Protein GI229820214 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.564871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAAG TCCTGCTCCT TCTCCTGGCC ATGGCTCTCG TGGCCGCCTG CGGCGGATTC 
GTCGCCGCAG AGTTCTCGTT CATCACCGTC GGCCGCGCCC AGGTCGAGTC GGCCGCGGAG
CGCGGCGACA AGCGGGCAGC CGGCGTCCTC GTCGCCCTGC GGACGCTCTC GACCCAGCTG
TCGGGCGCAC AGGTCGGCAT CACCGTGACG AACCTCGCGA TCGGGTTCCT GGCGGAGCCC
GCGATCTCGG AGCTCATCCG ACCCCTGCTC GAGCGCACCG ACCTCAGCGA GTCGGCGATC
TCGACGACGG CGATCACGAT CGGGCTGGTC GCCGCGACGG TGATCACGAT GGTGTTCGGC
GAGCTCGTCC CGAAGAACCT CGCGATCGCC CGCCCGATGG CCACCGCTCG CGCCGTGGCC
GGATTCCAGC GCGGCTTCAC GAAGGCCGTC GCCTGGCCGA TCCGCTTCTT CAACGGGACG
GCCAACCGGA TCCTGCGGGC CATGGGCATC GAGCCGCAGG AGGAGCTCGC CTCGGCCCGC
TCCGCCGAGG AGCTCACGGC GCTCGTCCGG CACTCCGCGA AGGAGGGCAC GCTCGCCCAC
GACACCGCCG AGCTCGTCGA GCGTTCGCTC GCGTTCGGCG ACCGGCGCGC CCGCGACGCG
ATGACGCCGC GCTCCCGGAT GGTCACGCTC GCACCGGACG ATCCCGTGTC GGAGCTCATC
GCCCGATCGA AGGCGACGGG TCACTCCCGG TTCCCGGTGG TGGACGTCGT CGAGCAGGAC
GGGCACACGG AGGCCCGCGT GGCGGGGATC GTGCACGTCC GAGCCGCGCT CTCCGTCCCG
TTCGAGCGGC GCACGAGCAC ACCCGTCTCC TCGGTCCTCG CTCCCGCGAC GTTCGTCCCC
GACTCCATCG AGCTCGACGA GCTCATGGAC GATCTCCGCG AGGGCGGGCT GCAGATGGCC
CTCCTCATCG ACGAGTTCGG CTCCCTCGCC GGTCTCGTCA CGCTCGAGGA TCTGGTCGAG
GAGATCGTCG GCGAGGTGCG CGACGAGCAC GACTACGACG AGCCGGAGCC CGCGCGCGAC
GGGAACGGCG GGTGGGTGCT CTCGGGCCTC ATGCGCATCG ACGAGGCGTC CGACGTCGTG
GACTGCGCGC TGCCGGAGGA CGAGGCGTAC GACACGCTGG GCGGCCTCGT GACGACAGAG
CTCGGGCGGT TCGCGGAGGT CGGCGACACC GTCGTCGTGG ATGCGAAGCA CGTGCCGGGC
GTCCCCGACC GCAGGATCGA GCTCGAGGTC CTCGCGATCG ACGCGCGACG CGTCGACACC
GTGCACCTGG CGATCGTCGA GCGCGACGGC GACGCGGCAC CTGCGGGCGG TGAGGAGGAG
TGA
 
Protein sequence
MTEVLLLLLA MALVAACGGF VAAEFSFITV GRAQVESAAE RGDKRAAGVL VALRTLSTQL 
SGAQVGITVT NLAIGFLAEP AISELIRPLL ERTDLSESAI STTAITIGLV AATVITMVFG
ELVPKNLAIA RPMATARAVA GFQRGFTKAV AWPIRFFNGT ANRILRAMGI EPQEELASAR
SAEELTALVR HSAKEGTLAH DTAELVERSL AFGDRRARDA MTPRSRMVTL APDDPVSELI
ARSKATGHSR FPVVDVVEQD GHTEARVAGI VHVRAALSVP FERRTSTPVS SVLAPATFVP
DSIELDELMD DLREGGLQMA LLIDEFGSLA GLVTLEDLVE EIVGEVRDEH DYDEPEPARD
GNGGWVLSGL MRIDEASDVV DCALPEDEAY DTLGGLVTTE LGRFAEVGDT VVVDAKHVPG
VPDRRIELEV LAIDARRVDT VHLAIVERDG DAAPAGGEEE