| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1713 |
|---|
| Symbol | |
|---|
| ID | 7859655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 1962524 |
|---|
| End bp | 1964227 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643865801 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_002881731 |
|---|
| Protein GI | 229820205 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAAGG CCACGAGGTT CGCTGCTGTC GGAATCGCTG CCGTTCTCGC GCTCACCGGC
TGCACGGGCG CCGGGGAGCT CGAGCCGGAT CCCACCGCGG AGGCCACGAC GGCGGCCATG
ACGACGGCGC CCGAGGAGGC GACCACGCTC GTCGCGGGCG ACGATCCCGC TGCTCTCGCG
ATCACCGCGA GCCAGATGTT CTTCACGTCG GCCTCGATCG CCGTTCTCGC TGACGCCGGC
GATCCCGCAG CCCAGCTGCG TGCGGCGTCG GTCGCCACGC TGCTCGGCCT CCCGGTGCTG
CTGACCGGGG CGTCCGAGTC GGCCGACGCG GACGTGGCCG CCGAGCTCGC CCGCCTCGAC
GCGACGACAG CCCTCACGGT GGGGACCGAC GTCGTGGTCC CGGAGGAGCC AGGACGGCAG
CGCACGCGCG TGATCCCGGC ACCGAGCGAC CCGGACGACC TCGCGACGGT CGTCGGTCGG
GAGATCACGG ATGCCCAGGA CGTCACGGCC GACGGCGAGA TCGAGGCGCT CGCCGGCCTG
GAGGTCCCGG GGAGCACGAT CCTCACGCTC GTCCCCGAGC CGGGCGACGA GCCGACCGAC
GACGCGTCGG GCACGCCCGG CTCCACGGAC GTCGACCCGG ATGCGGGCGG GCTGCCGATC
TTCCTCGACA CGCAGGTCCA GGAGGGCGTG CTTGCGGTGT CGGACGGAGA CACCGGCCAG
GTGGCCGCTC TGGGGACGGC GCGCGCGGCA GGTGCCGACG TCCTCGTCGT CCCGAGCGGC
GACACGCGGA CGGATCCGGC GGCGATCCAG GCGATCGCCG CGCGAGCCGA CGACCTCGTC
GTGGGGTTCG GCTCGGCGCT CGGCGCACCG GAGGTGTTCA CGAGCCGCAT CGCGGCCGCC
CGCACCGGCG TGGAGCTGCC GGCCGGGGGG CAGCTGGCCC TCCCCGGGGC GAGGTACGTG
GCGCTCTACG GCAGCCCGGT GACGCCGACG CTCGGCGTGC TCGGCGAACA GGGGGTGGCC
GAGACGATCG CCCGCGCTCA GCAGCACGCG GCCCCGTACG CCGCGCTGAC CGACGAGCCC
GTGGTCCCGG CGCTCGAGAT CATCGTGACC GTGGCGTCGA GCTCGCCGGG CGACGACGGG
AACTACTCGA ACGAGTGGCC GAGCGAGACG TTCCGGCCGC TCGTCGACGC CGCGCACGAG
GCAGGGATGT ACGTCGTGCT CGATCTCCAG CCCGGCCGGA CGTCGTTCCT CGACCAGGCG
AAGCTGTACG CGGACCTGCT CGCGCTGCCG TACGTCGGCC TTGCGCTCGA CCCCGAGTGG
CGCCTCGGCC CGGACCAGGT GCACCTCGAG CAGATCGGAT CCGTGGACAT CGCCGAGGTC
AACGAGGTCG TGACGTGGCT CGCGGACCTG ACGGCCGAGA ACCACCTCCC GCAGAAGATC
CTCATCCTGC ACCAGTTCAG CCTGTCGATG ATCACGAACC GGGGTGGGCT CGACACGTCC
CGCGAGGAGC TGGCCGTCGT CATCCACGCC GACGGGCAGG GCAGCCAGGC GGCGAAGGCG
GAGACGTGGG CGGCGCTGCA CGCCGACGCA CCGGAGGGCG TGTTCTGGGG CTGGAAGAAC
TTCTACGACG AGGACGCCCC GATGCTCACC CCCGAGCAGA CGTTCGCGGT GACCCCGCTG
CCGGACTTCG TGAGCTACCA GTAG
|
|---|
| Protein sequence | MRKATRFAAV GIAAVLALTG CTGAGELEPD PTAEATTAAM TTAPEEATTL VAGDDPAALA
ITASQMFFTS ASIAVLADAG DPAAQLRAAS VATLLGLPVL LTGASESADA DVAAELARLD
ATTALTVGTD VVVPEEPGRQ RTRVIPAPSD PDDLATVVGR EITDAQDVTA DGEIEALAGL
EVPGSTILTL VPEPGDEPTD DASGTPGSTD VDPDAGGLPI FLDTQVQEGV LAVSDGDTGQ
VAALGTARAA GADVLVVPSG DTRTDPAAIQ AIAARADDLV VGFGSALGAP EVFTSRIAAA
RTGVELPAGG QLALPGARYV ALYGSPVTPT LGVLGEQGVA ETIARAQQHA APYAALTDEP
VVPALEIIVT VASSSPGDDG NYSNEWPSET FRPLVDAAHE AGMYVVLDLQ PGRTSFLDQA
KLYADLLALP YVGLALDPEW RLGPDQVHLE QIGSVDIAEV NEVVTWLADL TAENHLPQKI
LILHQFSLSM ITNRGGLDTS REELAVVIHA DGQGSQAAKA ETWAALHADA PEGVFWGWKN
FYDEDAPMLT PEQTFAVTPL PDFVSYQ
|
|---|
| |