Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1636 |
Symbol | |
ID | 7858832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 1881797 |
End bp | 1883680 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643865723 |
Product | glycerophosphoryl diester phosphodiesterase |
Protein accession | YP_002881654 |
Protein GI | 229820128 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.41391 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGGGT CAGCACCTTC GCGCACCACC GGCCGGACCA GGACGACGCA TTCCCGGCTC GTCGCGAGCC TGGCGGGCGC CGCCCTGGTC GGCGGGCTCA CGCCCCTGCT GGCCACCGCC CCCGCGGTGG CCGCACCGGG CGACGTCCTC CTCCAGGAGA ACTTCGACGA GGTCGCCGAC GGCAGCCTTC CCGCCGGGTG GCTGGCCGCG GACGGCACCT GGGAGGTCGT GGACGGGGAG CTCATCGGCA CGTCGACCGG ATCCGGCCAG AACGCACGTC TCACCTTCGG CGAGCACGCG AACAACTACC GCGTGGAGGC GACGGTCCGC TTCGAGTCGG TCGTGAACGC GGCCCGATGG GCCGGCGTCA TCCTCGACAT CGGCGCGGAC GGCACGGTGC CGTGGAGCCA CGCGGTGCTG CGCTCCGGCT CGACCGCCCC GAACGGCACC GAGTTCGCCG TCCGCACCGG CGGAAACACG TGGAACGTCC TCACGGCCAC GCCCGCGCCG GCCGACGCCG GGGTGGGGAA CGACGTGCGG ATCGCCGTCG AGGTCCAGGG CGGGCAGGCG CGCTGGTTCT GGGAAGGCAC CCAGCTCGCC CGCACCACGG TTCTCCCGAG ATCCGGCGAC GGGGTGCTCG GACTCATCGC CAACGGCTCG ACCGTCGCGT TCGACGACGT CGTCGTCACG GAGCTCGAGC CTGCGTCGCT GCTGCGCGAC GATTCGGAAC CGGCGTACGC CGTCGCCCAC CGGGGCTACT CGACCATGGC GCCCGAGAAC ACGTCGTTCG CGATCGCTGC CGCGATCCAC TCCGGTTCCC GCGGCATCGA GCTCGACGTG CAGCGCACGG CGGACGGCGC CCACGTCCTG TGGCACGACG ACACGATCGA CGCGAAGTCC GACGGCACCG GTCGGATCGC CGACCACACG CTCGAGGAGC TGCGACAGCT CGACGTCGGT TCGTGGTTCG ACCCCGTCTT CAGCGGGGCG CGCATCACGA CGTGGGAGGA GGCGCTCGAC CAGCTCGCCG GCACCGGCCT GCTCATCAGC CTCGAGATCA AGTCCGGGTC GGTGCCGGAG ACGCTGCAGG CGGTGATCGA CCGCGGGATG ACCGACCAGG TCGTGTTCAC GAACTTCTCG ACCGACCTCA TCGCGCAGGC GCAGGCCTTC GCGCCCGAGA TCCGGCGCGG CCTCATCATC TCCGAGGCGG CCGCCGACCC GATGCCCGCC GTGGAGCAGT ACGGGCTGTC CGCGTACATC GCGGGGGCGA ACTCGATCAT CGCGAACCCG AGCATCGTCC CGCTCCTGCG CGAGGCGGGA GTCGCCGTCC AGGCGTGGAC GATCAACGAC GCGAACCGGT GGCAGCAGCT CACCGAGATC GGCATCGACG GCATGCTCAC CGACCGCGCC GCCGAGTACG TCGGGTACAC CGAACGCGTC CAGCAGGACG CCGCCCAGCC CGCGCAGGTG AGCATCGTGT CGCCCGGCGA CGGGGCACGC CTCGACCGCG CGGACTCGCT CGCGATCGGC GTGAACGCGG TCAACGCGAC GAACCTCACG GGAAGTCTCG ACGGTCGCGG CGTCGACCTG GGCGCTCCCG TCGCGCTGCT CGGGCTCGCT CTCGGGGAGC ACGTCGTCGA GGTGTCGGCG GACGGCGTCG AGCCGGTCTC GCGGACCTTC GAGCTCGAGG CCTCCCAAGC CGGGCTGCGT GCGCTCGTGG ACGCGGCGGA CGGGCTCTCC CGCGGGCAGC GCACCACGCT GCACTCCCTC GTCACGGCGG AGCTGTGGCG GGCCGTCGCG GGCGCTGCCG ACGCGTACGC ACGGGCCGGG ACCGAGCCGG AGCTCATGCG CCTGGTCGCC GGGGACGCGC GGGCTCTGCT CTGA
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Protein sequence | MHGSAPSRTT GRTRTTHSRL VASLAGAALV GGLTPLLATA PAVAAPGDVL LQENFDEVAD GSLPAGWLAA DGTWEVVDGE LIGTSTGSGQ NARLTFGEHA NNYRVEATVR FESVVNAARW AGVILDIGAD GTVPWSHAVL RSGSTAPNGT EFAVRTGGNT WNVLTATPAP ADAGVGNDVR IAVEVQGGQA RWFWEGTQLA RTTVLPRSGD GVLGLIANGS TVAFDDVVVT ELEPASLLRD DSEPAYAVAH RGYSTMAPEN TSFAIAAAIH SGSRGIELDV QRTADGAHVL WHDDTIDAKS DGTGRIADHT LEELRQLDVG SWFDPVFSGA RITTWEEALD QLAGTGLLIS LEIKSGSVPE TLQAVIDRGM TDQVVFTNFS TDLIAQAQAF APEIRRGLII SEAAADPMPA VEQYGLSAYI AGANSIIANP SIVPLLREAG VAVQAWTIND ANRWQQLTEI GIDGMLTDRA AEYVGYTERV QQDAAQPAQV SIVSPGDGAR LDRADSLAIG VNAVNATNLT GSLDGRGVDL GAPVALLGLA LGEHVVEVSA DGVEPVSRTF ELEASQAGLR ALVDAADGLS RGQRTTLHSL VTAELWRAVA GAADAYARAG TEPELMRLVA GDARALL
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