Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1571 |
Symbol | |
ID | 7859729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 1804796 |
End bp | 1808128 |
Gene Length | 3333 bp |
Protein Length | 1110 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 643865658 |
Product | UvrD/REP helicase |
Protein accession | YP_002881589 |
Protein GI | 229820063 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTCG TCGACGACGC CGCCCGCTCG CGGATCGCCA CCGACACGTC GTCCTCGCTG TTCGTCGAGG CCGGCGCCGG CTCCGGCAAG ACCCGCTCGC TCGTGGAGCG CGTGGGCACG CTCGTGATGG ACGACGGCGT CCCGCTGGCC CAGATCGCGG CCATCACGTT CACGGAGAAG GCCGGCGCGG AGCTGCGCGA CCGGCTCCGG GGGGAGTTCG AGCGCGTGTG GCGGCGGGCG CGGCCGGGCG GACCGCAGGA GGATCCCGCC CGCTCGTCCC TGGCCGAACG GGCGCTCGAG GACCTCGACG GCGCCGCGAT CGGCACGCTC CACTCGTTCG CGCAGCGGAT CCTCGCCCGG CACCCGGTCG AGGCGGGTCT GCCGCCCCTG ATCGAGGTGA GCGACGAGGT CGCGTCCGGT GTCGCGTTCG ACGAGCGGTG GTCGGTGCTC CAGCGCGAGC TGCTCGACGA CGAGGAGATG GCGCCCCGCC TGCTGCTCGC GATGGCGGCG GGCGTGACGT TCGACCACCT GCGCTCGCTC GCGCGCGCGT TCGGCGCGGA CTGGGACCTC ATCGAGGGCC ACGTCCTGCG CGGCGCGAGC AACGACAGCG CCCTCCCGGA CGCCGCGCCG CTCGTGGACG AGGCGCAGGC GCTCGCCGCG CGTGCCGCGG AGTGCACGGA CCCGGACGAC AAGCTGCTCA CCAGGCTCTC CGAGATCCGG GCGTGGGCGC AGGTGCTCGC GGCCGCCGAC GGCGATCCCC GCCGCACGTA CGCGGCGCTC GTCGCGCTGG GGGAGCCGAG GTTCGGGCGG GTCGGGCGCA AGACGAGCTG GCCGGACGTC GACGCGGTGC GGGCCGCGTG CACCGCCCTC GTGGAGCACG TGAGCGCCGC CGCTGCCGCG TTCGCGGATG CCGCGGTCCG TCCGCTCGCC CGGTGGATCG CCGCACGCGT GGTGCGCGAC GCACGCGCCC GCGCCGCCGA GGGCGCCCTG GAGTTCCACG ACCTGCTCGT CCTCGCCCGC GACCTGCTCC GGACCCGCGA GGACGTGCGC AGCTCGCTCC AGGCGGCCTA CCCACGTCTG CTCCTCGACG AGTTCCAGGA CACCGACCCG ATCCAGGTCG AGCTGGCGGT GCGCATCGCT GCCGGGGCCG AGGGCGGCGC CGGGGACTGG CACGACGTGC GCGTCCCGCC GGGGTCGCTC TTCGTCGTCG GCGACCCGAA GCAGTCGATC TACCGGTTCC GGCGCGCCGA CATCCGCACG TTCCTCGACG TGCGCACGTG GCTCGGCGAC GTGTGCTCGC TCACCACGAA CTTCCGGTCG GCCGCGCCCG TTCTCGCCTG GGTCAACGCG ACGTTCGGGG AGCTCATCCA GCCGGTCGAC GGCGCCCAGC CCGCCTACGA GCCGCTGGAC GCGGTGCGGC CCCCGGTGGG GGTCGGTCCG GCGGTGACGG TGCTCGGCGC CCAGCCGCAC CAGGACCTGC CCCGCGCGAG CGCCGCGCTG CTGCGCGAGC GCGAGGCGGC CGACGTCGCG GCGGTGCTGC TGCGCGCGGC CGGCCAGGGC TGGACGGTCC ACGATCCGCG CGGCGGCGAG GAGCGGGAGC TGCGGTGGGG GGACGTGGCG GTCCTCGTTC CCGCGCGGAC GTCGCTGCCG TTCCTCGTCG AGGCGCTCGA CGCCGCCGGG ATCCCGTACC GGGCCGAGTC GAGCTCGCTC GTGTACTCCG CGACCGAGGT TCGCGCCCTC ATGGCCGCCG CACGGGCGAT CGCCGACCCC GGCGACCAGT TCTCCGTGGT CACCGCGCTG CGCTCGCAGG TCTACGGGTG CGGCGACGAC GACCTGTGGT CGTGGAAGCG TGACGGCGGT TCGTTCCACC TGCTCGCGCC GGCCGACGAG GACCGAGCCG ACCACCCGGT CGCACAGGGG CTCGCCCACC TGCGCACGGT GCACCGGTGG GCGCGCTGGG CGACGCCGAG CGAGGTCCTC GCGCGGGTCG CCGCCGACCG CCGCATGTTC GAGGTCCCGG CCGACGCACC CGCGCACGCG CGCGACGTCT GGCGCCGGCT CCGCTTCGTG CTGGACCAGG CCCGCGCCTG GAGCGAGGTC TCCCACGGCG GGCTCCGGGC CTACCTGGCG TGGGCGGCGC GGCAGGCCGA CGAGTCCTCC CGGGTGGCGG AGGCGATCCT CCCGGAGACG GACGTCGACG CGGTGCGGAT CATGACGATC CACGCGGCGA AGGGGCTCGA GTTCCCGCTC GTCGTGCTGT CCGGGCTCAC GTCGCAGCAG CGTCGGGCGA GCGGCGTGCG CCTCCTGTGG ACCGACGACG GGTACGCGGT GCGGCTGCGG CAGTCCGTGC AGACGAACGA CTTCACCGCC GCGGCCCCGC TCGACGAGCA GATGGACGAC CACGAGCGCC GCCGCCTGCT CTACGTCGGT GCGACTCGGG CGCGCGACCA TCTCGTCGTG TCGCTGCACC GTGGGCCGAC GGCGGCCGCC ACCCACGCGA GGCTGCTGGC CGACGCGGGC GGGAGCGGCG CGGGAGCGCA CGCGTTCACC GCGGCCGACG ACGGCGCTGC TCGCCCCGAG CGCGCGGCGG CACCTGCCGC TCCCGACCAC GCGGCGTGGG CGGGCCGCCT CGAGGCGGCC CGCGCGGCGT CCCGCCGGGT CGCGACGCAC AGCGCGTCGG GCCTCGAGGG GACGGAGCCC GAGGTCGTCT TCGCGCACTC CGCGACGGGA CGCGCGAACG CGGGGGACGC CGTCGTCGAT CCCGGAGGAG GGGAGGGCGA CGCGCTCCCG GGCAGCGCGA AGGGTCCGCG CGACCTCGCC CTGCCACCGT GGTCGAAGGG CAGGTACGGG ACGGCGATCG GGCGGGCCGT GCACGGCGTG CTGCAGGCCG TGGACCTCCG CGTCCAGCTC GCCGACGCCG GCGAGCTGGA CGCGGCCGTC GAGGCACAGG CGCGCGTCGA GGGCGTTCTC GAGTTCGCGG ACGTCGTGGC CGACCTGGCC CTGTCGGCGC TCGCGAGCCC GCTCGTGCAG GACGCGGCGC GCCGGGAGCA CTGGGCGGAG ACGTTCGTCG CGACGCTCGA ACCGGACGGC CGGGTGCTCG AGGGCGTCGT CGACCTGCTC GTGCGGGACG CCGACGGCGC GGTGACGATC GTCGACTACA AGACCGACGC CGTTCCGGAG GCCGCGCTCG GCGTGCGCAC GGAGTTCTAC GCGCCGCAGC TGCGCGCGTA CGCCCGGGCC CTGCGGGACG CGGGCGCCGA CGTGCGACGC GCGGTGCTCC TGTTCCTCGC GCCCGACGGC GCGGTGGAAC GCGAGGTGAC GCTCGGGTTG TGA
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Protein sequence | MTLVDDAARS RIATDTSSSL FVEAGAGSGK TRSLVERVGT LVMDDGVPLA QIAAITFTEK AGAELRDRLR GEFERVWRRA RPGGPQEDPA RSSLAERALE DLDGAAIGTL HSFAQRILAR HPVEAGLPPL IEVSDEVASG VAFDERWSVL QRELLDDEEM APRLLLAMAA GVTFDHLRSL ARAFGADWDL IEGHVLRGAS NDSALPDAAP LVDEAQALAA RAAECTDPDD KLLTRLSEIR AWAQVLAAAD GDPRRTYAAL VALGEPRFGR VGRKTSWPDV DAVRAACTAL VEHVSAAAAA FADAAVRPLA RWIAARVVRD ARARAAEGAL EFHDLLVLAR DLLRTREDVR SSLQAAYPRL LLDEFQDTDP IQVELAVRIA AGAEGGAGDW HDVRVPPGSL FVVGDPKQSI YRFRRADIRT FLDVRTWLGD VCSLTTNFRS AAPVLAWVNA TFGELIQPVD GAQPAYEPLD AVRPPVGVGP AVTVLGAQPH QDLPRASAAL LREREAADVA AVLLRAAGQG WTVHDPRGGE ERELRWGDVA VLVPARTSLP FLVEALDAAG IPYRAESSSL VYSATEVRAL MAAARAIADP GDQFSVVTAL RSQVYGCGDD DLWSWKRDGG SFHLLAPADE DRADHPVAQG LAHLRTVHRW ARWATPSEVL ARVAADRRMF EVPADAPAHA RDVWRRLRFV LDQARAWSEV SHGGLRAYLA WAARQADESS RVAEAILPET DVDAVRIMTI HAAKGLEFPL VVLSGLTSQQ RRASGVRLLW TDDGYAVRLR QSVQTNDFTA AAPLDEQMDD HERRRLLYVG ATRARDHLVV SLHRGPTAAA THARLLADAG GSGAGAHAFT AADDGAARPE RAAAPAAPDH AAWAGRLEAA RAASRRVATH SASGLEGTEP EVVFAHSATG RANAGDAVVD PGGGEGDALP GSAKGPRDLA LPPWSKGRYG TAIGRAVHGV LQAVDLRVQL ADAGELDAAV EAQARVEGVL EFADVVADLA LSALASPLVQ DAARREHWAE TFVATLEPDG RVLEGVVDLL VRDADGAVTI VDYKTDAVPE AALGVRTEFY APQLRAYARA LRDAGADVRR AVLLFLAPDG AVEREVTLGL
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