Gene Bcav_1547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1547 
Symbol 
ID7859703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1775854 
End bp1777611 
Gene Length1758 bp 
Protein Length585 aa 
Translation table11 
GC content78% 
IMG OID643865632 
Productdihydroxyacetone kinase 
Protein accessionYP_002881565 
Protein GI229820039 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2376] Dihydroxyacetone kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.462978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.25069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCACC TGGTCAACGA CCCCCACTCC TTCGCCTCCG ACGTGCTGGA CGGCTTCGTC 
GCCGCCCACC CCGACGACGT CGTGCGGGTG CACGGCGGCG TCGTGCGAGC CACCCGCACA
CCCCAAGGCC AGGTCGCCGT CGTCCTCGGG GGAGGGTCCG GCCACTACCC GGCGTTCGCC
GGCTGGGTCG GGCCCGGCAT GGCGCACGGT GCGGTGTGCG GCAACGTGTT CGCGTCGCCG
TCGGCGTCGC AGGCCGTCTC GGTGGTCCGC GCGGCACAGG CCGGCGGCGG GGTGCTGCTG
GGCTTCGGCA ACTACGCCGG CGACGTGCTG CAGTTCGGCG AGGCCGCGCG GGAGCTTCGG
GCTGCGGGGA TCGACGTGCG GATCGTCACG GTGACGGACG ACGTCGCGTC GGCACCGCCG
GAGCGCGCGG AAGAACGCCG CGGCATCGCC GGCGACCTCG TCGTCCTCAA GGTTGCCGGC
GCCGCGGCCG CGGCCGGGTA CGACCTCGAC GACGTCGAGC GGGTCACCCG GATGACCAAC
GACCGCACGC GCACGATCGG CGTGGCGCTG TCCGGCTGCA CGCTGCCGGG GCAGGTCGAG
CCGCTGTTCG CCGTCGAGCC CGGCACGATC GCGCTGGGGT TGGGCATCCA CGGGGAGCCC
GGCCTCGCGG CGCACGCCCT CGGGACGGCG GCCCAGGTGG CGGACGAGCT CGTGGACCGG
CTGCTCGCGG AGCTGCCGTG CGACGTCGGC GACCGCGTGG CGGTGCTGCT CAACGGGCTC
GGCTCGACGA CCCACGAGGA GCTGTTCGCC GTCTATGGGC GCGTCGCGTC GCGGCTTTGC
GAGGCGGGGC TCGTCGCGGT GCGGCCGGAG GTGGGGGAGC ACGTCACGAG CCTCGACATG
GCGGGCCTCT CGTTGACCCT GACGCTCCTG GACCCCGAGC TCGAGACCCT GTGGCTCGCG
CCGGTGGACG CCCCGGCGCT GCGCCGCGGC GCGCCCGCAC CGGCAGCGAC CGGGGAGCGG
CGCGACGCCC GGGACGTCGA CCGGCCGGAG GAGGTCGCTG TCGCGGAGGG AACGCCCGAG
TCCCGCCGCG CGGCCGCCGT CGCTCTCGAC GCACTGGCTG CCGTGTGCCG GGCCCTGCGG
GAGGCCGAGA CCGAGCTCGG GGCGCTCGAC GCCGTCGCCG GGGACGGCGA CCACGGCCAG
GGCATGGTGC TCGGGGCCGC CGGGGCGCTC GCCGCGGGCC GGGCGGCGCA CGACTCCGGC
GCCGGCCTGG CCTCGGTGCT CCGCTCGTGC GGGGCGGCGT GGGCCGAGGC CGCCGGCGGC
ACGTCCGGCG CGCTGTGGGG CGGCGCGTTG CGTGCGGCCG CCGACGCGTT CGACGACGCC
TCGGCACCGG ACGCCGCTGC CGTGCTGGTG GCCGTGGAAC GGGCCGCCGA GGCGGTGACC
GCGGCCGGCG GTGCGTCGGT CGGCGACAAG ACGATGGTCG ACGCCGTCGT GCCGTTCGTC
GAGGCGCTGC GGAGCGCGCT CGGCGACGCC GCGCCCGCGG CGGCCTGGAG CACCGCGGCG
GCGGCGGCCG ACCGCGCAGC CGCGGGAACG GCGGATCTGG TGGCGAGGCG AGGTCGGGCG
CGCACGCACG GCGAACGCGG GATCGGTCAC CGGGACCCGG GCGCCGTCTC GTTCGCCCTG
GTGATGACGG CGGCCGGGCG GGTCCGCGGG GCGGACCTCG TCGAGGCCGC TGCGGACGCA
CGAGCGACGG AGGACTGA
 
Protein sequence
MTHLVNDPHS FASDVLDGFV AAHPDDVVRV HGGVVRATRT PQGQVAVVLG GGSGHYPAFA 
GWVGPGMAHG AVCGNVFASP SASQAVSVVR AAQAGGGVLL GFGNYAGDVL QFGEAARELR
AAGIDVRIVT VTDDVASAPP ERAEERRGIA GDLVVLKVAG AAAAAGYDLD DVERVTRMTN
DRTRTIGVAL SGCTLPGQVE PLFAVEPGTI ALGLGIHGEP GLAAHALGTA AQVADELVDR
LLAELPCDVG DRVAVLLNGL GSTTHEELFA VYGRVASRLC EAGLVAVRPE VGEHVTSLDM
AGLSLTLTLL DPELETLWLA PVDAPALRRG APAPAATGER RDARDVDRPE EVAVAEGTPE
SRRAAAVALD ALAAVCRALR EAETELGALD AVAGDGDHGQ GMVLGAAGAL AAGRAAHDSG
AGLASVLRSC GAAWAEAAGG TSGALWGGAL RAAADAFDDA SAPDAAAVLV AVERAAEAVT
AAGGASVGDK TMVDAVVPFV EALRSALGDA APAAAWSTAA AAADRAAAGT ADLVARRGRA
RTHGERGIGH RDPGAVSFAL VMTAAGRVRG ADLVEAAADA RATED