| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1544 |
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| Symbol | |
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| ID | 7859700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 1773060 |
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| End bp | 1773827 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643865629 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002881562 |
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| Protein GI | 229820036 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.255887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.188153 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCACT TCCCTGCGGA ACGCACCGCC GTCGTCACCG GCGCGGCCTC GCGGCGCGGC
ATCGGCCGCG CGGCCGCCGA GCGGCTCGCC CGCGACGGCT GGGCCGTCGG CCTGATCGAC
GTCGACGAGG GCGCCATCAA GGAGCTCGCC GGCGAGCTGA CCGACAGCTA CGGGGTGCCG
GCCGCCGCCG TCGGCGTCGA CGTCTCCGAC AACGCCGCGG TGCGCGACGC CGTCGACCAG
CTCGAGGAGA GGCTGCCGCA GCTCGTCGCG CTCGCCAACG TCGCCGGCGT CAGCTCGCCG
GCGCCGTACC TCGAGCTGAC GCCGGTCGAG TGGCACCGCG TGATCGACAT CAACCTCAAC
GGCGTGCACT TCGTGAGCCG GCGCGTGGCC GAGTCGCTCG TGCGCGGCGG CGGTGGGCGC
ATCGTGTCGA TCTCGTCGGT GTCCGCCCAG CGGGGTGGTG GCACGTACAG CAAGTCCGCG
TACTCGGTCG CGAAGGCCGG CGTCATCGGC CTGACCCGAG CTCTGGCCCG GGAGCTTGGC
CCGCACGGCG TGACGGTCAA CGCGATCGCT CCCGGCCCGA TCGACACCGA CATCATGGGC
GGCACCCTGA GCGACGAGCG CAAGGCGGCC CTCGTGGAGG AGCTGCTGGT CGACCGCGTC
GGGACGACGG CGGACATCGC GTCGGCGATC GCCTACCTCG CGGGCGAGGA GTCGGGGTAC
ATCACCGGTC AGACGCTCAA CGTCGACGGC GGTCTGTACA TGCACTGA
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| Protein sequence | MDHFPAERTA VVTGAASRRG IGRAAAERLA RDGWAVGLID VDEGAIKELA GELTDSYGVP
AAAVGVDVSD NAAVRDAVDQ LEERLPQLVA LANVAGVSSP APYLELTPVE WHRVIDINLN
GVHFVSRRVA ESLVRGGGGR IVSISSVSAQ RGGGTYSKSA YSVAKAGVIG LTRALARELG
PHGVTVNAIA PGPIDTDIMG GTLSDERKAA LVEELLVDRV GTTADIASAI AYLAGEESGY
ITGQTLNVDG GLYMH
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