| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1534 |
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| Symbol | |
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| ID | 7859690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 1762164 |
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| End bp | 1763474 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643865619 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_002881552 |
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| Protein GI | 229820026 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.191711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00957964 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGTCCA CCCGGCACAC ACCCCGTCGC ACGATCCGTC GCCCGGCCGC AGCCGCCGCC
GTCACCGCCT CGCTGGCCCT CGCGCTCGCC GCCTGCGGCG TCGGCGGCGG TGACGCCCCG
GGTGCCGACG AGACGGTCGG CCCTGCGTCC GACGCGCCCA TCCGCGCCAC CTGGTGGGGG
GTGGACAACC AGAACCAGGC GCTCGACGCG GCGATCGCGT CCTTCACCGA GGCCGGCGGT
CCCGAGGTGG CGGTCGAGCC GCAGCCGTGG GACGGCTACT GGGACAAGCT CGCGACGCTG
GTGGCGGGCC GCGACCTGCC CGACGTCGTC ATGCAGGCCG CGAGCCAGCT GCCGACCTAC
GCCGAGCGGG ACTCGCTGCT CGACCTCTCG CAGGTCGACC TCGACACGAG CGGGCTCGAC
GCGGGAATCC GCGACTTCGG GACGGTGGGC GACGCAAGCT TCGGCGTCGT CGCCGCGACG
AACGCGACGG GCTTCGTCAC GAACGCCGAC CTGCTCGGCG AGCTCGGCGT CGACGCACCG
GCGGGCGAGT GGACCTGGGA CGACCTCGCG GCGTTCGCCG ACCAGGTCCG GATGGCGAGC
GCCGGCGAGA CTTGGGGCGT CCAGGACGGG AGCGGCGACC TCATCCTGTT CATCCTGTAC
GTGCGCGACA GCGGCCGGGA GTTCTACGCG GACGACGGCT CGCTCAACGC GACGCCCGAC
GACCTGCGGG CGTGGCTGCA GCTGTGGGCC GACATGCGCG AGGCGGGATC CGTGCCGCCC
GCCGACGTCA CGGCGGAGTC CGCGGGCAAC ATGCCCGGCA GCCCGCTAGC CACCGGGCGC
GCCGCCGCCT CGTTCGCGTG GACCCAGGAC TACGTCGCCC TGCAGGCCGT GACGGACTCC
GCCCTCGACA TCGGCCTCCC GCCGCACAAC ACGGAGCACC CGAGCCTGTG GATCAACGCC
GCGAGCCTGT GGTCGATCTC CGCGACGTCC GGCAACCCGC AGGGCGCCGC CGACCTCATC
GACCACCTCG TCAACGACCC CGGCGCCGTC GAGGAGCTCG GCGCGACGCT CGGCATCCCG
CCCACGGCCG AGGCGCGGGC GCAGATCGCC GAGTCCGTCA CGGACGAGGA GCTGCCCGCC
GTCGAGTACA TGGACATCGT GGCCGAGAAC TCGCGCCCGC TGAACCGCCT GTGGCCGGAC
GGGTTCGCCG ACTCCCGGAC ACTGCTGGGA CAGCTCGCCG AGGCCGTCGC GTTCGGGCAG
ACGAGCATCG ACGACGCCGT CGACGCGTTC TTCGCCGACG CGGAAGGCTG A
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| Protein sequence | MKSTRHTPRR TIRRPAAAAA VTASLALALA ACGVGGGDAP GADETVGPAS DAPIRATWWG
VDNQNQALDA AIASFTEAGG PEVAVEPQPW DGYWDKLATL VAGRDLPDVV MQAASQLPTY
AERDSLLDLS QVDLDTSGLD AGIRDFGTVG DASFGVVAAT NATGFVTNAD LLGELGVDAP
AGEWTWDDLA AFADQVRMAS AGETWGVQDG SGDLILFILY VRDSGREFYA DDGSLNATPD
DLRAWLQLWA DMREAGSVPP ADVTAESAGN MPGSPLATGR AAASFAWTQD YVALQAVTDS
ALDIGLPPHN TEHPSLWINA ASLWSISATS GNPQGAADLI DHLVNDPGAV EELGATLGIP
PTAEARAQIA ESVTDEELPA VEYMDIVAEN SRPLNRLWPD GFADSRTLLG QLAEAVAFGQ
TSIDDAVDAF FADAEG
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