Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1452 |
Symbol | |
ID | 7860921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 1655131 |
End bp | 1656006 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643865539 |
Product | SMP-30/Gluconolaconase/LRE domain protein |
Protein accession | YP_002881472 |
Protein GI | 229819946 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.684281 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTCG GCGAGAGTCC ACGCTGGTTC AGGCGCGACG GGCGTCTTCA CTGGGTCGAC ATCGAGCACC GTACGCGCTT CTCCTGGGAC ACCAGGTCCC CCGAGCCGAC GGTCGTCGGC TACCCGCAAC GGGTCACCGC GGTCGCGCCT GCGGGCGGGG ACGGCATCGT CATGGTGCGG GGCGCGGATG TGGTCCTCGA GACACCGCGA GGAACGCGCG TACTCGTGAG CCTGGACGAC GTCGACCCCA GTTCGTCCCG CCCGAACGAT GCGCGTGCCG ACCACGCCGG TCGGCTCTGG GTCGGCTCGC TGGAGTTCGC CCCGTCGGGC ACAGGGGCAG CGCTCTACCG CGTCGACCGG AGCGGCGTCA CGAGGTGTCG CGACGGCCTG TCGCTGTCGA ACGGCATCGC CTTCAGCCCG GACGGCGCCT GGATGTACCA CGCGGACACC CTGAACCGGG TCGTCACGCG GTCGGCGCTC GCACCCGACG GCACGCTCCG CGACGCCGAG AGCTTCGCGC AGTGGGACGA CGCCTACCCG GACGGCCTCG TCGCCGACGC GGCGGGCGGT GTCTGGGTGG CCCTGTGGGG CGGCGGTCGC CTGGAGCGCC TCGACTGCTC CGGCGTCCTC ACTGACGTCG TCTCGACCCC GGGTGCCCAC CAGGTGACGG CGGCAGCGCT GGGAGGCAGC GATCTGCGCT CGCTGTACAT CACGACAGCA CTCGAGGGTG GCGGGGGCGG ACCGCGGGGC GGCTCCCTCT TCCGGGCGGA TGTGTCGGTC CCCGGCCTTC CCGAGCCCGA GGCGTCGTGG TGGGCCGACG AGCCCGAGCC GCTCGGGGCG TCGGACGGGA GGGGCGGCGC CGATGTCCGG TCATGA
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Protein sequence | MELGESPRWF RRDGRLHWVD IEHRTRFSWD TRSPEPTVVG YPQRVTAVAP AGGDGIVMVR GADVVLETPR GTRVLVSLDD VDPSSSRPND ARADHAGRLW VGSLEFAPSG TGAALYRVDR SGVTRCRDGL SLSNGIAFSP DGAWMYHADT LNRVVTRSAL APDGTLRDAE SFAQWDDAYP DGLVADAAGG VWVALWGGGR LERLDCSGVL TDVVSTPGAH QVTAAALGGS DLRSLYITTA LEGGGGGPRG GSLFRADVSV PGLPEPEASW WADEPEPLGA SDGRGGADVR S
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