Gene Bcav_1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1393 
Symbol 
ID7861693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1585149 
End bp1586399 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content75% 
IMG OID643865477 
Producthypothetical protein 
Protein accessionYP_002881414 
Protein GI229819888 
COG category[S] Function unknown 
COG ID[COG3876] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0125178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.499824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGC CCTCCCTGTC AGCGACGACA ACGTTCGCGC GCCGCACCGC TCTCGTCCGC 
ACGGGTCTCG ACCGAGCCGT CGAGGACCCG GGCCTCCTCG GTGCCGAGCC GATCGCCATG
GTGTGCAACT ACACGTCGGT GACCGCCGAC CTGCGTCGCG GCGTCGACGC GCTCGCGGCT
CTCGGCGGCG TCGACATCCG CGCCATCTGC GTGCCGGAGC ACGGCTACTG GGGTGCCGTG
CAGGCGGGCG AGAGCGAGGC GGGGGCGCCG GACGTCCGCA CCGGCATCCC GATCGTGGAC
ACGTACCTCG TGGAGGGGGA GGCGCTGGAG CGGCTGCTCG CCGGGACCGG TGCCGCCCGC
ATCGTCCTGG ACCTGCAGGA CATCGGCTCC CGGTTCTACA CCTACATCTG GACGATGCTC
GACGTGATGT GTGCCGCGGC GAACGCCTCG CTCGCGGTCA CCGTCCTCGA CCGCCCGAAC
CCGATCGGCG CCGGCCGCGC GGCCGGGCCG GGCCTGCTCG AGGAGTGCGC GAGCTTCGTC
GGCCGCGAGA ACGTCCCGCT CGTGCACGGC CTGACGATCG GGGAGCTCGC CCGCTGGTTC
GCCGCCGAGT TCGTGCCGGC GCGGACCGGG CGCGAGGTCG CTCTCGACGT CGTCGCGATG
GACGGGCCGG GCGACGCCAC CGGCGACGCC GCCGCCACCG GGATGACCTG GGTGCCGCCG
TCGCCGAACA TGCCCAGCCC GACGACGGCG CGGCTCTACC CGGGTACGTG CCTGGTCGAG
GGGACGCTCC TGTCGGAGGG CCGGGGGACG ACGTCGCCGT TCGAGACGGT CGGCGCGCCC
TGGCTCGACG GACGCTTCGC CGACGCGCTC GCCGAGCGGG AGCTGCCCGG CGTCGCCGTC
CGCGAGGCGT GGTTCCGGCC GGTGTTCTCC AAGCACGCGG GCGAGCTGTG CGGCGGCGTG
CAGCTGCACG TCACGCGGCC CGAGGACCTC GATCCGCTGG GCATCGGGTT CGAGCTGCTC
GCCGTCGCAC GGCGCGTGGC GCCCGACGAG CCGCTGTGGC GGCAGCAGAG CGAGGCGGGA
CGGCCGCCGT TCGCCGACCT CCTCTGGGGG TCGCCGGCCC TGCGTACCGG GATCGACGCC
GGGCAGGACC TCGCGGCTGT CCTCGCCGCG AGCCCCGAGC CGCTCGAGCC GCCCGAGTCG
GTCCGGCTCT ATCCTCGCGC CACGCCCTCG GAAGAAGCAG GTGAGCGATG A
 
Protein sequence
MTMPSLSATT TFARRTALVR TGLDRAVEDP GLLGAEPIAM VCNYTSVTAD LRRGVDALAA 
LGGVDIRAIC VPEHGYWGAV QAGESEAGAP DVRTGIPIVD TYLVEGEALE RLLAGTGAAR
IVLDLQDIGS RFYTYIWTML DVMCAAANAS LAVTVLDRPN PIGAGRAAGP GLLEECASFV
GRENVPLVHG LTIGELARWF AAEFVPARTG REVALDVVAM DGPGDATGDA AATGMTWVPP
SPNMPSPTTA RLYPGTCLVE GTLLSEGRGT TSPFETVGAP WLDGRFADAL AERELPGVAV
REAWFRPVFS KHAGELCGGV QLHVTRPEDL DPLGIGFELL AVARRVAPDE PLWRQQSEAG
RPPFADLLWG SPALRTGIDA GQDLAAVLAA SPEPLEPPES VRLYPRATPS EEAGER