Gene Bcav_1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1378 
Symbol 
ID7861678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1572214 
End bp1572882 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content77% 
IMG OID643865462 
ProductAllophanate hydrolase subunit 1 
Protein accessionYP_002881399 
Protein GI229819873 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2049] Allophanate hydrolase subunit 1 
TIGRFAM ID[TIGR00370] conserved hypothetical protein TIGR00370 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.239875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCTG CCGACGACGT CGGTGACGGC GTCCGCGCCT ACGGCCAGGA GGCGCTGCTC 
GTCGACGTCG CCGGCGCCGC GGAGGCCGCT CGGCTCGCCA CGGCGCTGAG GGCGGACGCG
ACGGCGCGGG ACCGGCCGCT GGTCGACGTC GTCCCCGCGG CGCGCACCGT CCTGGTGCGC
GTGCCGCCCG GGACGGATCT CGCCGAGGTC GCAGGATGGG CGAGGTCGGT GCGCGCCCGC
CGTTCCGACG AGCCGGTGGC CGAGGGGCGC GACGTCGTCG TCGACGTCGT GTACGACGGC
GCCGATCTCG ACGACGTCGC CGCGGCGACG GGTCTGGACG TCGCGGAGGT CGTGGCCCGG
CACGGCGCCG CGACGTACAG AGCGGCGTTC GCGGGCTTCG CGCCGGGTTT CGTCTACCTC
ACGGGCCTCG ACCCGGCCCT GCACCTGCCG CGGCGAGCGA CGCCGCGGAA GCGGGTCCCC
GCAGGCTCGG TGGCCGTCGC GGCGGAGTTC TCCGCCGTCT ACCCACGGTC CGGTCCCGGC
GGCTGGCACC TGCTCGGGCG GACCGACGCC GTGATGTTCG ATGCCGGTGC CGATCGTCCG
GCGCTCGTCC AGCCCGGCGA CCGCGTCCGG TTCCATCCCG TCCCCGCACC CCGGGGGAGG
ACGCGGTGA
 
Protein sequence
MSAADDVGDG VRAYGQEALL VDVAGAAEAA RLATALRADA TARDRPLVDV VPAARTVLVR 
VPPGTDLAEV AGWARSVRAR RSDEPVAEGR DVVVDVVYDG ADLDDVAAAT GLDVAEVVAR
HGAATYRAAF AGFAPGFVYL TGLDPALHLP RRATPRKRVP AGSVAVAAEF SAVYPRSGPG
GWHLLGRTDA VMFDAGADRP ALVQPGDRVR FHPVPAPRGR TR