Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1271 |
Symbol | |
ID | 7859582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 1440333 |
End bp | 1441286 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643865355 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_002881293 |
Protein GI | 229819767 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.607833 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.171456 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGACCA GGGTCCGGGC GATCGCCCTG CCGAACGTCG CGCCGTTCGA GCTCGGTGTC GTGTGCGAGG TGTTCGGCAT CGACCGGACC GACACCGGCG GCCCGGTGTT CGACTTCGCC GTGTGCACCC CGACGCCCGG CACGGTCTCC ACGAAGCTCG GCTTCGGCGT CGACGTCCCT CTCGGCCTCG ACGCCGCCGA GGGCGCCGAC CTCATCGCCG TCCCGGCGTA CGGCGACGCC CGCGGCGTGG ACGACGCCGT CCTCGAGATC CTGCGCCAGG CGCACGCCCG CGGCGCCTGG GTGCTCAGCG TGTGCAGCGG AGCGTTCGCC CTCGGCCAGG CGGGACTGCT CGACGGGCGC GGCTGCACGA CGCACTGGAT GTACACGGCC GAGCTGCAGC GCGCGTTCCC GCTGGCACGG GTCGACCCCG ACGTGCTCTA CGTCGAGGAC GACAGGATCG TCACGAGCGC GGGGACCGCC GCGGGCATCG ACGCGTGCTT GCACATCGTG CGCCGCGAGC TGGGTGCCGG GGCCGTCGCC GCCATCGCTC GCCGGATGAT CGTCCCGCCC CATCGCGACG GCGGCCAGGC CCAGTACATC GAGCGGACGG CACCGCAGGA CCCGCAGGCG CTCGCCGGCG TCCTCGCCTG GGCGTCCGAG CACCTCGACG CCGACCTCTC CGTGCCGTCC CTCGCCGCAC GTGCCGTGAT GTCCGAGCGG TCGTTCGCCC GGCGGTTCCG GGCCGAGACG GGGACGACGC CGGCCGCCTG GGTCGCGCGG GCGCGTCTCG CCCGGGCGCA GGAGCTCCTG GAGACGACGA CGGCGAGCGT CGAGGAGATC GCCCGAGCCT GCGGGTTCGG CGGGGCCGCG GCGCTCCGAC ACCACTTCGC CCGCGCGTTC TCGACGACGC CGCTCGCGTA CCGGCGCCGG TTCGCGCAGG CGCTCGCCGG CTGA
|
Protein sequence | MLTRVRAIAL PNVAPFELGV VCEVFGIDRT DTGGPVFDFA VCTPTPGTVS TKLGFGVDVP LGLDAAEGAD LIAVPAYGDA RGVDDAVLEI LRQAHARGAW VLSVCSGAFA LGQAGLLDGR GCTTHWMYTA ELQRAFPLAR VDPDVLYVED DRIVTSAGTA AGIDACLHIV RRELGAGAVA AIARRMIVPP HRDGGQAQYI ERTAPQDPQA LAGVLAWASE HLDADLSVPS LAARAVMSER SFARRFRAET GTTPAAWVAR ARLARAQELL ETTTASVEEI ARACGFGGAA ALRHHFARAF STTPLAYRRR FAQALAG
|
| |