Gene Bcav_1266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1266 
Symbol 
ID7859577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1436944 
End bp1437267 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content73% 
IMG OID643865350 
Productanti-sigma factor 
Protein accessionYP_002881288 
Protein GI229819762 
COG category 
COG ID 
TIGRFAM ID[TIGR02949] anti-sigma factor, TIGR02949 family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.293532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0945618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC CGCGCGACGG TGCCGGTGAC GACGAGGCTG CGCTGCTGGC GGCTCGCTCC 
GTGAGTGCGC AGTGCCAGTG CACCGAGGCG CTGGAGAAGC TCGAGACGTT CCTCGACTCC
GAGATGGGCG AGCTGGACGC CGACCGGCTC CGGACGCACC TCGAGGCGTG CGAGCCGTGC
CTCGAGGCCG CCGACCTCGA GCAGCGGCTC CGCAACCTCG TCCGGCGCGC GTGCCACGAG
CAGGCTCCGG ACGGCCTGCG TGCGCGGGTC CGGACGCAGC TCACCGTGAT GAGCACGCGC
GTGGTCATCT CCCGGCCCGA CTGA
 
Protein sequence
MSTPRDGAGD DEAALLAARS VSAQCQCTEA LEKLETFLDS EMGELDADRL RTHLEACEPC 
LEAADLEQRL RNLVRRACHE QAPDGLRARV RTQLTVMSTR VVISRPD