| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1223 |
|---|
| Symbol | |
|---|
| ID | 7858879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 1384844 |
|---|
| End bp | 1385698 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643865307 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_002881245 |
|---|
| Protein GI | 229819719 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0726394 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCG CCGAGGTCTT CGCCGACGTC GACTACCCGG TGACCGCCCA GCGGCTGCGC
GTCACGAGCG ACGTGCCCGC GCACACTCAC GACTTCGTCG AGCTCACGTT CGTGATCGAC
GGGGCCGCCG AGTACGTGAC CCGGACCGAC CGCCGCCCGA TCGGGCGCGG TGACGTGCTC
GCCGTACGCC CGGGCACGTG GCACGCGTTC AGCGCCTGCC GGCGTCTCGA GGCGTACAAC
GTCTACATCG GCCAGGAGCT GCTCCGTCGC GACCTGGCGT GGGTGCTCGA CGACGCCCGG
CTCGCGCGCC TCCTCCTCGC CGGCGGCGAC TCGTCGATCC CGTTGCCGGA GTCCACGCTC
GAGGCGGTCG CCATCCGGCT CGACGAGCTC GCCGGCGTCG TTCCCGACGG CGTCCCGGGT
GGGGTCCTGC GGCGGAGCCT TCTCGGCTGC GCCCTCGGGG AGCTGCTCGT GTCATGGTCG
ACGCCGTCCC GCATCCCGGC GATCGACCCG GCCGTGGCCA GGGCGCTGAC CTCGATGACC
GACGACGTCG CGCGCGCCTG GACCGTCGCG GAGCTCGCCG CCGTCAGCCA CGTGTCCGTC
TCCCACCTGC ACCGGCGCTT CTCCGACCAG CTCGGCACGA CGCCGATGGG CTGGCTCGCC
GGGGCACGGG CCGAGCGGGC GGCCGTCCTC CTCGTGCGGA CGGCCGCTCC CGTCGCCGCG
GTCGGGCGGG CGGTCGGGTG GTCGGACCCG AACTACGCCA GCCGTCGGTT CCGCGGCGTG
TACGGCATGA CGCCCACGGA GTACCGACGT CGATACGCGT TCGGCCCGGC GGGAGCGTCA
CGCGCCGGTC AGTGA
|
|---|
| Protein sequence | MSRAEVFADV DYPVTAQRLR VTSDVPAHTH DFVELTFVID GAAEYVTRTD RRPIGRGDVL
AVRPGTWHAF SACRRLEAYN VYIGQELLRR DLAWVLDDAR LARLLLAGGD SSIPLPESTL
EAVAIRLDEL AGVVPDGVPG GVLRRSLLGC ALGELLVSWS TPSRIPAIDP AVARALTSMT
DDVARAWTVA ELAAVSHVSV SHLHRRFSDQ LGTTPMGWLA GARAERAAVL LVRTAAPVAA
VGRAVGWSDP NYASRRFRGV YGMTPTEYRR RYAFGPAGAS RAGQ
|
|---|
| |