Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1217 |
Symbol | |
ID | 7858873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 1378717 |
End bp | 1379607 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643865301 |
Product | Glycerophosphodiester phosphodiesterase |
Protein accession | YP_002881239 |
Protein GI | 229819713 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.838465 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGC GCTGGTGGCT GCCCGCCGCC GTCCTGCTCG TCGCGACCGC AGGGTGCGCG GCACCGGCCG GGACCCAGGA GGACGCGACC TCCACCGCGT CGCCGGACGC GAGCGCCGCG GCCACCGCCG ACGTCACGCT CGTCGGGCAC CGGGGGGCCG CCGACGTCGC TCCGGAGAAC ACCGTGCCGT CGTTCGAGGC GGGAGCCGAG GCGGGCGTAG ACCTCATCGA GGTCGACGTC CAGCTCTCGG CGGACGGCGT GCCGTTCCTC TTCCACGACG ACACGGCGGA GCGGACGACG AACGTCGCCG ACGTGTTCCC CGACCGCGTG GACGACCCCA TCACGTCGTT CACGTGGGCG GAGCTCCAGC AGCTCGACGC CGGAGCGTTC TTCCGCGACG AGTTCGCCGG GACGCCGATC GCGAGCCTGG ACGACGCCGC GCTGACCGTG GGACCGGATA TCGGCGTCGA CATCGAGCTC AAGGCCCCCG AGAACTCCCC CGGGGTCGAG CAGGTCGTGG CCGACGCGCT GTCGACCGAG GCGTGGGCGC CGCTCGTCGA CGCCGGCCTC GTCGTCGTCA GCTCGTTCGA CGTCGACGCG ACGCGGGCGT TCCACGACCT GCGGCCCGAC GTCCCGGCCT GGCCGATCGT CGACGCCATC CCCGACGCGG CATGGGTCGA CGGCATCGCC GACCACGCCA GCGGCATCGT GACGAACTAC GCCAACCTCA CGGCCGACGG CGTCGCGCTC GCGAGCGCCG CCGACCTGCC GGTGTGGGTG TACACCGTCG ACGACGCCGG GTCGATGCTC GCCCAGGTCG AGCTCGGTGC CACGGGCATC ATCACCGACG TGCCGGCACT CGCCGCGCAG GCGCTCGGCC GCACGGACTG A
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Protein sequence | MKKRWWLPAA VLLVATAGCA APAGTQEDAT STASPDASAA ATADVTLVGH RGAADVAPEN TVPSFEAGAE AGVDLIEVDV QLSADGVPFL FHDDTAERTT NVADVFPDRV DDPITSFTWA ELQQLDAGAF FRDEFAGTPI ASLDDAALTV GPDIGVDIEL KAPENSPGVE QVVADALSTE AWAPLVDAGL VVVSSFDVDA TRAFHDLRPD VPAWPIVDAI PDAAWVDGIA DHASGIVTNY ANLTADGVAL ASAADLPVWV YTVDDAGSML AQVELGATGI ITDVPALAAQ ALGRTD
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