Gene Bcav_1200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1200 
Symbol 
ID7858856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1361589 
End bp1362743 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content72% 
IMG OID643865284 
Productglycosyl transferase group 1 
Protein accessionYP_002881222 
Protein GI229819696 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.979166 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGGC CCATCCGGCG CGTGGTGCTC CTGCAGAACC AGCTGGGCGA CCTCGGTGGC 
GTGTCCCGAT TCTGCGACGC CCTCTCCCGC GGCCTGCTCG CCCGCGGCTA CGCCGTCGAG
ATCGGTGCCG CGGAGCCTGC TGCGGGCGCG ACGATGCGCT ACGCGGCGGA CGTGCCGACG
TGGACGCTGG CGCCGCAGCT CCCACCGGGC GCGGCGACCG ACGGCCTCCC GGGCGGACGA
CGTCGTCGCG AGCTGCCGGG TGCGCTGCAC CGGTTCCGGC GCCGTGTGGA GTCCGCTGCC
GCGGAGCGCT TCGCCGGTTA CGACGACGAC ACCGTGGTGA TCGTGACCCA GCTCTACGCG
CGTGAGCGGG TCGGGGAGGC GCTGGCTCCG GAACGGCGAC GCTGCGCCGA GGTCGTGCAG
TATCACAACT CGTACTCCGC GGCGGCCCGC TCGCGAGACC TGGCGCGGGC GCGCGAGGCG
TACACCGCGG CTGACGCGTT CCTCGTGCTC ACGCAGGCCG ACGCCGCCCT GTTCCGCGAG
GCCGGATTCA ACAACATGGG GCACATCGTC AACCCCGTCA CCGTCCCCGT CGCTCCCGAG
GCGGACCTCG AGGACGGCGT CGTCGTCTCG CTCGGTCGGT ACGACAGGCA GAAGTCCCTC
GACCACCTGA TCCGGGCGTG GTCCGCGCTG GACGACGACG TGACGCGGGG CTGGCGGCTC
GAGCTGTACG GCGAGGGGCC CGAACGCTCC CTGCTGGAGG AGCTGATCGA CGACCTCGGC
CTGCGCGGCA CGGTGCGTCT CAACGGCCCC ACGGCGCAGG CCCACGACGT TCTCGCCCGT
GCCGCCGTGA GTGCCCAGTC GTCGCAGTTC GAGGGCCTCC CGCTCGCCCT GATGGAGGCG
AGCGCGCTCG GGGTGCCGAG CGTCGCGTAC GACTGCTCGC CGGGGATCAG GGAGATCGTC
GTCGACGGCG TGACGGGTCT GACAGTGCCG CTGAACAACC TGGAGCGACT CGCCGACGGG
TTGGCCACGC TCATGGCCTC GCGCGAGGTG CGCCTCGCCT ACGGCCGCAA CGCCCACCGC
CGGATGCAGA GCGAGTTCTC GCTCGACTCG GTGCTCGACG CGTGGGAGCG ACTCTTCTCG
GAGCTCGTCC GATGA
 
Protein sequence
MSRPIRRVVL LQNQLGDLGG VSRFCDALSR GLLARGYAVE IGAAEPAAGA TMRYAADVPT 
WTLAPQLPPG AATDGLPGGR RRRELPGALH RFRRRVESAA AERFAGYDDD TVVIVTQLYA
RERVGEALAP ERRRCAEVVQ YHNSYSAAAR SRDLARAREA YTAADAFLVL TQADAALFRE
AGFNNMGHIV NPVTVPVAPE ADLEDGVVVS LGRYDRQKSL DHLIRAWSAL DDDVTRGWRL
ELYGEGPERS LLEELIDDLG LRGTVRLNGP TAQAHDVLAR AAVSAQSSQF EGLPLALMEA
SALGVPSVAY DCSPGIREIV VDGVTGLTVP LNNLERLADG LATLMASREV RLAYGRNAHR
RMQSEFSLDS VLDAWERLFS ELVR