Gene Bcav_1176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1176 
Symbol 
ID7860635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1323322 
End bp1325526 
Gene Length2205 bp 
Protein Length734 aa 
Translation table11 
GC content71% 
IMG OID643865260 
Producthypothetical protein 
Protein accessionYP_002881198 
Protein GI229819672 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.112013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.874891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCCCGC CGGTGCTCAT GCTGCTGGTC GTGGCGATCG GTGTCGCCGT GCCGCTGCGG 
AACGACCGCG GCTTCTACTA CTGGGACGAC ACGGCCGCGG CGGCGGTCGG TGTGTGGCAA
CGGATCGCCG ACCAGGTGCT CTCCGGGACA TTCCCGATCC TGCAGCTCGA CATGTGGCGG
GGCGGTAACT TCGTCGCGGA GGCCGCGACG GGGATGTTCA ACCCGGTCAT GGTCGCCCTG
ATGGTGGCGA TCCACCCGCT CGACAACCTC GCGATCGGCA TCACGCTGGC GAAGGGCGTG
CTGTTCGCGC TCGTCGCGCT CGGCGTCTAC CTCCTCGCCC GGGAGTACGG CGCCACGCGC
TGGCCGGCGG CGATCGTCGG AGCCTCCATG GCGCTGAGCG GCTACACCGT GTTCATGGAC
GGGACGTCGT GGGTCAACGG CCTCGCGATC ACGGCGTTCA CGCCGTGGCT GTGGTGGGCG
GCGCGCCGCC ACCTCGAGGG GCGGGGGTCG ATCTGGGTCG CCCTCGTGGC GGGCTACCTG
CTGGTCTCGA CGGGCAACCC GTACGGGGTG CTGGCGTTCG CCGCCGTGAT GGGTGCGCTC
GGCGTCGAGA CCCTCGTGCG GCGTCGTCCG CGCAAGCTGT GGTGGCTCGG CGGGCAGATC
GTCGTCGCGG CGCTCACCGC CGTCATCGTC TACCTGCCGT TCCTGCTGAC GTCGACCGTC
GGCAGCCGCG CCGGATCCGT CACGGGGAAC GACGAGTTCT TCGCGCCGGG CCTCAGCGAC
CTGCTCGGGA TGAGCTCGCC GACGTTCCAG CCGTACATCA CGATGTTCGG CGGCAACCCG
ATGTCGTTCC CCGGTCTGTA CCTGGCCTGG TTCCTCCTGC CGCTCATCCC GTGGCTGCGC
TGGCGTTCCC TCGTGGCACG GTGGCCGGCC TGGTCCGGTG CGGCGGCGTT CGGGGTGTTC
TACCTGCTGC TCGTGCTCGG CCCGTCCCAG ATCTGGATGT TCCGGTGGCC GGCCCGCCTC
CTGCCGTTCC TCGCGATCGC GATCTTCGTG ATCTTCGCTG TCGCGCTGAC GGCCGGCCTG
GCGCGCGACA GGGTGAGGCT TCGAGCGTGG TTGACGACGG CGATCGTGCT GCTCGGCGCG
TGGCAGACGT TCTCGGACCG CCCGAACCAG TACGTGTGGG CGGTGGCGGG CCTCATCGGC
GTGGCGGCGC TGATGTACGC GTTCCTCAAG GTGCGCAGCG GCGCCCAGTG GTTCGCAGTC
GTCGCCGTCG GGGCGATCGG GGTGCTGCTC GTGCAGACGC ACTGGATGCC GGTCAACCGC
AGCGTCGCCG ACTACCAGTT CCCCCAGTCC CGGTCGGAGA TCCAGGAGAG CTTCGCGGGC
CGGTACGAGG GGATGACCGT GCAGGTCGCG AACCGGACGC TGCCGAACGA GCTCGAGACG
GGCGACGGCG CCTGGCGCGA CATCCTGTTC GGCAACCTGT ACTCCGTGTC CGGCGTGGAG
TCGACGACGG CGTACAGCGG CATCGGATTC ACGAAGCACG ACAACGCGCT GTGCCTCACG
TACTTCGGCG GCACGTGCCC CGGCGCGTGG GACGCGCTCT GGGAGAACCC CGAGGGTGAG
GACGAGCAGC TGGCCGATCT CCTCCGGGTC GAGACCGTCG TCGTCCTCCT GAACATCGTC
CCCGACCCCG TCGCCCCGGA GGGGTGGACA CAGGTGGACG AGACGGACTT CGTGCGGGTG
TTCCACCGCG ACGAGCCCAT CCCGTTCCCC GACGGGCGCC TCAGCATCGC GGGCGACGCC
GTCGACGTCT CATCCGACGT GAGCACGGGC GACCGGGCGG AACGCGTCGT CGTCTCCACG
GGCGACGGCA CCGCACAGGA CCGGAGCCTC ACGTTCTCGC GGCTCGCCTG GCCGGGGTAC
ACGGTGACGG TCGACGGGAC GCCGGTGGAG CCGATCACCG GCCCCGCCGG TCTCCTCCGG
GTCGAGCTGC CCGCCGGGCT CACCGACGCC GAGGTCGAGA TCAGCTTCCT CCCGCCAGGG
TGGACGGCGG GCGTGGCGGC GTTGGGCCTG GCGGCCGCCA TCGCGGTCGG CCTGGTGGTG
GTCGACGGCG TCCAGCGGCG CCGCTCGCGT CGCTCGGTGC GCGGGGCGAC GACGGAGGAC
GCGACCCTCG ATCAGCCGGC CCCGGATGCG AGCCTGCGAG GCTAG
 
Protein sequence
MLPPVLMLLV VAIGVAVPLR NDRGFYYWDD TAAAAVGVWQ RIADQVLSGT FPILQLDMWR 
GGNFVAEAAT GMFNPVMVAL MVAIHPLDNL AIGITLAKGV LFALVALGVY LLAREYGATR
WPAAIVGASM ALSGYTVFMD GTSWVNGLAI TAFTPWLWWA ARRHLEGRGS IWVALVAGYL
LVSTGNPYGV LAFAAVMGAL GVETLVRRRP RKLWWLGGQI VVAALTAVIV YLPFLLTSTV
GSRAGSVTGN DEFFAPGLSD LLGMSSPTFQ PYITMFGGNP MSFPGLYLAW FLLPLIPWLR
WRSLVARWPA WSGAAAFGVF YLLLVLGPSQ IWMFRWPARL LPFLAIAIFV IFAVALTAGL
ARDRVRLRAW LTTAIVLLGA WQTFSDRPNQ YVWAVAGLIG VAALMYAFLK VRSGAQWFAV
VAVGAIGVLL VQTHWMPVNR SVADYQFPQS RSEIQESFAG RYEGMTVQVA NRTLPNELET
GDGAWRDILF GNLYSVSGVE STTAYSGIGF TKHDNALCLT YFGGTCPGAW DALWENPEGE
DEQLADLLRV ETVVVLLNIV PDPVAPEGWT QVDETDFVRV FHRDEPIPFP DGRLSIAGDA
VDVSSDVSTG DRAERVVVST GDGTAQDRSL TFSRLAWPGY TVTVDGTPVE PITGPAGLLR
VELPAGLTDA EVEISFLPPG WTAGVAALGL AAAIAVGLVV VDGVQRRRSR RSVRGATTED
ATLDQPAPDA SLRG