Gene Bcav_1161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1161 
Symbol 
ID7860620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1303416 
End bp1305011 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content69% 
IMG OID643865245 
Productglycosyl transferase family 2 
Protein accessionYP_002881183 
Protein GI229819657 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.231473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCATCT TCCTGCTCCA GCTGCGGCAT ACCTTCGAAC AACAGTCCGA AATCCATCTG 
TTCGCCGTCT TCTCGCTGAT CGTCTGGGCG CTGTGGCTCG TCAAGGTCGT GCTCTCGCGA
CGCTACCGCG GGTGGACGGA GCCGCACGAG GCGACGAGCA GCGTCGTCGT CCCTGTGGTC
GACGAGCCCG AGGACCTCTT CCGCGACGTG CTCACCCGCA TCGTCGAGCA GGGCCCGGAC
GAGGTCATCG TCGTCATCAA CGGCGCCCGC AACTCGACGC TCGAGGCGAT CTGCGACGAG
TTCGGCCCCG CCGTGCGCTG GGTGCACACA CCCATCCCGG GCAAGCGCAA CGCCGTGAAG
ATCGGCACGG CGCTGTCACG CGGTGAGATC ACCGTCCTCG TGGACTCGGA CACGGTCTGG
ACCCCGGGCA CGCTGCCGGA GCTCCTCAAG CCGTTCGCGG ACGCGCGGGT CGGCGGGGTC
ACGACCCGCC AGCGCATCCT CGAGCCGGAG CGGTCGTGGA TCACGCGGTG GGCCGACTGG
CTCGAGAACA CCCGAGCCCT GTACTCGATG CCGGCGCAGA GCGCACTCGG CCAGGTCGGG
TGCCTCCCGG GTCGGACCAT CGCGTTCCGC CGCAACATCC TCATGCGGGT CATGCCGAAG
TTCATGACCG AGGAGTTCCT CGGCGTCTTC CTCGAGGTCT CGGACGACCG GACGCTGACC
AACCTCACGC TCAAGGAGGG CTACCGCACC GTCTACCAGC ACTCGAGCCT GGTCTACACG
GACGCGCCGC TGCAGGTGCG CAAGCTCTTC AAGCAGCAGC TGCGCTGGGC CCGCGGGAGC
CAGTACAACA CCCTGCGGAT GCTGCCGTGG ATGCTCGGCC ACGCCCCCGT GCTCGCCGTG
TTCTTCCTCG TCGACATCAT CCTGCCGTTC CTGCTGTTCG GCACGATCGC CGGTTGGATC
TACCGGGCGG TCAGCGGCAC CGGCGTCAAC CTCTACCAGG CCATCCTCGA GACCTACGGC
GTCAGCACCG GTCTGGTGTG GGTGCTCGGA CTCATGATCG CCTCGTCGGT GCTCTCGATG
GCGATCCGCC AGGTGCGGCA CCTGCAGGAG AAGCCGAGCG ACTTCGTCCG GCTCCCGGTC
TTCATCGTGG TCTCGACCCT GTTCCTCATG CCGATCCGCC TGCTCGGGTT CGTACGGATG
GCCCACGCGA GCGGATGGGG GACCCGGGCC GGGGCGTACG CCGGCGGACG GGCGGAGGAA
GACGCCGTCG CCGGTGCGTC GCTCGCGTCC GGCGAGCTGG AGGTCGTCGA TCGGGAGCCG
GCCCGACCCC CGGACCCCGT GCCGCACGAA CGGGACGCCT TCGACGAGCT GATCCTCGGC
TCCTACGGTG ACGACCCCGC GCGTCCGGGC GGCGCCGCCG TCGCCACTCG GCCCGCCGAA
CCCGAGCTCG ACACAGTGGC GCCGGCACCG ACACGCAGCC GGCGCGTCAG CGCCCGGCCA
CCGAGCCGTC GTCGTCGTCG CCTCAACCCC CTCGCGGCCG TCCCGTACGG CATCGCCGCG
CTCATCCTCG CTCTGGAGGC CCTGCTCTAT GTCTGA
 
Protein sequence
MFIFLLQLRH TFEQQSEIHL FAVFSLIVWA LWLVKVVLSR RYRGWTEPHE ATSSVVVPVV 
DEPEDLFRDV LTRIVEQGPD EVIVVINGAR NSTLEAICDE FGPAVRWVHT PIPGKRNAVK
IGTALSRGEI TVLVDSDTVW TPGTLPELLK PFADARVGGV TTRQRILEPE RSWITRWADW
LENTRALYSM PAQSALGQVG CLPGRTIAFR RNILMRVMPK FMTEEFLGVF LEVSDDRTLT
NLTLKEGYRT VYQHSSLVYT DAPLQVRKLF KQQLRWARGS QYNTLRMLPW MLGHAPVLAV
FFLVDIILPF LLFGTIAGWI YRAVSGTGVN LYQAILETYG VSTGLVWVLG LMIASSVLSM
AIRQVRHLQE KPSDFVRLPV FIVVSTLFLM PIRLLGFVRM AHASGWGTRA GAYAGGRAEE
DAVAGASLAS GELEVVDREP ARPPDPVPHE RDAFDELILG SYGDDPARPG GAAVATRPAE
PELDTVAPAP TRSRRVSARP PSRRRRRLNP LAAVPYGIAA LILALEALLY V