Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1126 |
Symbol | |
ID | 7859980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 1266773 |
End bp | 1269091 |
Gene Length | 2319 bp |
Protein Length | 772 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643865210 |
Product | VanW family protein |
Protein accession | YP_002881148 |
Protein GI | 229819622 |
COG category | [V] Defense mechanisms |
COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGAAT CCGAGACCGG CGCACGCGCG ACCGACGCTC CCGACGAGGA GTCGACGGGC GCTGCTCCGG AGACGGAGCC GGAGCAGGGC GTCGACGACG CAGCCGGTGC CGCGCAGCAT GGTCCGTCGG CGGAGCCTGC TGCGGCCGAG GCCGCCGCTG AGACGCAGGT GCGCGGGATC CCCGTCGTGC CGGCGCAGGA GCCTGCCGAG CCGGCGGAGG CGAACGCTGC CGAGCCGCCT GAGGCGGGCG CGACCGAGGT CGCCGAGCCC GCGGACGACC AGGCCACGGA GGCCGAGCCA GAGCCTGCCG AGCCGGTGGA GGCGGACGCT GCCGAGCCGC CTGAGGCGGA CGTGACCGAG GTCGCCGAGC CCGCGGCCGA CGAGGCCACG AAGGTCGAGC CAGAGCCTGC CGAGCCGATG GACGAGGTCG TGGCGGAGCC TGCCGACCCG ACCGAGGCGG ACGCGACCGA GGTCGCGGAG CCCGCGGCCG ACGGCGAGGC GACCGAGGTG ATGGCGGAGC CCGCCGCACT CGCGGCCGGC GCGACAGGCG GCGGCGATTC ACCCCTCGAC GAGCTCGAGG GCGAGCCGCC CAGCCACCGC GGACGCAAGA TCGCCCTCGG AGTGGGGATC GGCGTCGTCG TCCTCGCAGC CGCCTACGCG GGTGCGGCAT GGTTCGTCGC CGACCGTGTG CCGCGCGGGG CGACAGTGGC CGGCGTCGAG ATCGGCGGGC TCACCACCGA CGACGCCGTC GCTCGCCTCA CCGACGACCT CGCCGATCTC GCGACCGAGC CGATCGACGT CCGTGCGGGC GACGCCCAGA CGACCATCGA CCCCGCGGCC GCGGGTCTCG CGCTCGACGC CCAGGCCACC GTGGAGGCAC TGTCCGGGTT CTCCTGGGAC CCGCGCGACG TGTTCCGGCA CGTGCTGGGC ACCGGTGAGG AGCCGGCGAT CAGCACGGTG GACGCCGCCG CCTTGGACGC CGCACTCGTC GCCGCGAACG ACGACGTCGC GATCGCGCCG ACGGAGGGGT CGGTGGTGTT CGCCAACGCC GAGCCGGTCG TGACCGACCC GGTGGACGGC GTCGGGCTCG ACCTCCCCGC GACGGAGGAG CTGCTCGTGA GCAGCTGGCT CACCGCGGAG CGTCCGCTCG CGCTGCCCAC GGAGTCCGTG ACGCCGAACA TCGACGACGC GGCGATCGAG GAGGCACTGA GCACGATCGC TGAGCCCCTG GTCAGCGCGC CGGTGTCGGT CGTGGCCGGC GAGGCGACGG TGCCGCTGAG CGTCGAGCAG CTGACGTCCG TGGCGACCCT CGTCCCCGAG GGGTCGCGCC TCGTGCTCGA GCTGGACGGC GACGCCCTCG CCCAGCTGCT CGGCGAGGCG GCGCCCGACG TCGGCACGGC TCCCCAGGAC GCCCGCATCG AGCTGCAGGA CGGCGCGCCC GTCGTCGTCC CGTCCGTGAA CGGCACCGGA ATCGACCCCG CGGCGCTCGC CGACGCCGTG GCGGCGGCGG CCACCTCGAC CACGGAGCGC ACCGCCACCG TGGAGCTCAG CGAGACCGAG GCGGAGTTCA CGACGGCCGA CGCCGAGGCG CTCGGCGTCG TCGAACGCAT CTCGGAGTTC TCGACGCCCC TGCCCCCGTA CCCCGACCCG CCGCGCACCG AGAACATCCA GATCGGCGCG AGCCGCGTGA CGGGCATCCT CCTCATGCCG GGCGACACGT TCAGCCTGCT CGACACGCTG AGTCCCTTCA ACGCCGCGAA CGGGTACCAC CAGTCCGGCG TCGTCGAGAA CGGGTTCGAG GCGCGGGCGT ACGGCGGCGG GCTGTCGCAG CTGTCGACGA CGCTCTTCAA CGCCGCGTTC GAGGCCGGGC TCGAGGACGT CACGCACAAG CCGCACTCCC GATGGTTCTC CCGGTACCCG GAGGGACGGG AGGCGACCCT GTTCGAGGGC AGCGTCGACA TGCAGTTCCG CAACACCACC GACCACGGCA TCCTGCTGCA GGCGTGGGTC GCGGGCGGCC GCACGCACGC GGCGATCTGG GGCACGCCGA CGTTCGACGT CGACATCACG ACGGGTGAGC GGTACGCGTT CACCTCGCCC CGCACCGTGT ACAACACGTC ACCGGAGTGC ATCGCGGAGT CCGGCGGGTC GAACGGGTTC TCGGTGCAGG TGCGCCGCGT CGTGTCCCTC GACGGCGCGG TCGCGCGCGA CGACACGTAC ACGTGGTCCT ACCAGCCGTG GAACACGGTC GTGTGCGGGC CGGACCCGGC GACCCAGCCC GATCCCCCGA CCCCGACCCC GGACCCGGGC GGCGGCTGA
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Protein sequence | MTESETGARA TDAPDEESTG AAPETEPEQG VDDAAGAAQH GPSAEPAAAE AAAETQVRGI PVVPAQEPAE PAEANAAEPP EAGATEVAEP ADDQATEAEP EPAEPVEADA AEPPEADVTE VAEPAADEAT KVEPEPAEPM DEVVAEPADP TEADATEVAE PAADGEATEV MAEPAALAAG ATGGGDSPLD ELEGEPPSHR GRKIALGVGI GVVVLAAAYA GAAWFVADRV PRGATVAGVE IGGLTTDDAV ARLTDDLADL ATEPIDVRAG DAQTTIDPAA AGLALDAQAT VEALSGFSWD PRDVFRHVLG TGEEPAISTV DAAALDAALV AANDDVAIAP TEGSVVFANA EPVVTDPVDG VGLDLPATEE LLVSSWLTAE RPLALPTESV TPNIDDAAIE EALSTIAEPL VSAPVSVVAG EATVPLSVEQ LTSVATLVPE GSRLVLELDG DALAQLLGEA APDVGTAPQD ARIELQDGAP VVVPSVNGTG IDPAALADAV AAAATSTTER TATVELSETE AEFTTADAEA LGVVERISEF STPLPPYPDP PRTENIQIGA SRVTGILLMP GDTFSLLDTL SPFNAANGYH QSGVVENGFE ARAYGGGLSQ LSTTLFNAAF EAGLEDVTHK PHSRWFSRYP EGREATLFEG SVDMQFRNTT DHGILLQAWV AGGRTHAAIW GTPTFDVDIT TGERYAFTSP RTVYNTSPEC IAESGGSNGF SVQVRRVVSL DGAVARDDTY TWSYQPWNTV VCGPDPATQP DPPTPTPDPG GG
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